Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0330.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p... 43 1e-04
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein. 43 1e-04
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 29 2.5
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 7.6
AF016451-9|AAB66005.2| 524|Caenorhabditis elegans Udp-glucurono... 27 10.0
>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 93 EXEFDVRFNPDVYSAGIKHAAAPEHLAKQRHLVKEAAXFXLTTXI 227
E + ++FNPD +S+ +KHA E+L +QR +V +AA F LT I
Sbjct: 690 EDRYVMKFNPDCFSSNVKHAPT-ENLERQRRVVVDAADFLLTQKI 733
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VAPXDGAGLTEXLHARGINVRYLGRVALAL 349
V P DG L + +H GIN+RYLG + L
Sbjct: 745 VQPIDGDNLADIMHINGINIRYLGEIGKRL 774
>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 93 EXEFDVRFNPDVYSAGIKHAAAPEHLAKQRHLVKEAAXFXLTTXI 227
E + ++FNPD +S+ +KHA E+L +QR +V +AA F LT I
Sbjct: 690 EDRYVMKFNPDCFSSNVKHAPT-ENLERQRRVVVDAADFLLTQKI 733
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VAPXDGAGLTEXLHARGINVRYLGRVALAL 349
V P DG L + +H GIN+RYLG + L
Sbjct: 745 VQPIDGDNLADIMHINGINIRYLGEIGKRL 774
>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
Length = 1247
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 93 EXEFDVRFNPDVYSAGIKHAAAPEHLAKQRHLVKEAAXFXLTTXI 227
E + ++FNPD +S+ +KHA E+L +QR +V +AA F LT I
Sbjct: 690 EDRYVMKFNPDCFSSNVKHAPT-ENLERQRRVVVDAADFLLTQKI 733
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 260 VAPXDGAGLTEXLHARGINVRYLGRVALAL 349
V P DG L + +H GIN+RYLG + L
Sbjct: 745 VQPIDGDNLADIMHINGINIRYLGEIGKRL 774
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 194 GSGRLPAHHADXGLRAGVRGESVAPXDGAGL 286
GSG L HHA G A RGE V P G+
Sbjct: 170 GSG-LQMHHAGGGGGASARGEVVVPRSSVGI 199
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 194 GSGRLPAHHADXGLRAGVRGESVAPXDGAGL 286
GSG L HHA G A RGE V P G+
Sbjct: 233 GSG-LQMHHAGGGGGASARGEVVVPRSSVGI 262
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 194 GSGRLPAHHADXGLRAGVRGESVAPXDGAGL 286
GSG L HHA G A RGE V P G+
Sbjct: 211 GSG-LQMHHAGGGGGASARGEVVVPRSSVGI 240
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 342 SATRPRYRTLMPRACXXSVSPAPSIGATLSPRTP 241
+ +R R L P +SP P+I A +P+TP
Sbjct: 308 NTSRARNAGLRPAPSAPPLSPEPAIAAVKTPKTP 341
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 342 SATRPRYRTLMPRACXXSVSPAPSIGATLSPRTP 241
+ +R R L P +SP P+I A +P+TP
Sbjct: 308 NTSRARNAGLRPAPSAPPLSPEPAIAAVKTPKTP 341
>AF016451-9|AAB66005.2| 524|Caenorhabditis elegans
Udp-glucuronosyltransferase protein51 protein.
Length = 524
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 68 RRRHHCAGTLARVILLFLSAAN 3
R+ H CA T+ V+ LFL+AAN
Sbjct: 2 RQIHFCALTILAVLPLFLNAAN 23
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,778,972
Number of Sequences: 27780
Number of extensions: 63334
Number of successful extensions: 199
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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