Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0329.Seq
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.9  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 684 KDDEQLRRSATPVPTWPPQGTTRSPLKTS-SSEHL 583
           KD + L R  T   +WP +   R+P+  S ++ HL
Sbjct: 22  KDFDTLYRDCTTASSWPGRPPKRAPVGLSLAASHL 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 675  EQLRRSATPVPTWPPQGTTRSPLKTSSSEHL 583
            E   +   PV   PPQ TT      SS+EH+
Sbjct: 1001 EDCTKPPEPVTPAPPQVTTGVDTGASSTEHM 1031



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
 Frame = -1

Query: 660  SATPVPT---WPPQGTTRSP 610
            S T  PT   WP QGTT  P
Sbjct: 1069 STTTRPTTTNWPTQGTTIPP 1088


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = +2

Query: 530 QCGRRVLVLELGKKWKHNKCS-----LDEVFKGLR 619
           QCGRR  VL+    WK    S     +D+VF+  R
Sbjct: 401 QCGRRADVLKFWFMWKAKGTSGLEKHVDKVFENAR 435


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 151 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARRNFEKYQ 273
           +LTELEK P V++     L+    ++ R SV  +       +Q
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 151 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARRNFEKYQ 273
           +LTELEK P V++     L+    ++ R SV  +       +Q
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 151 MLTELEKLPGVQL--GDFLLQFELDEPRESVREIARRNFEKYQ 273
           +LTELEK P V++     L+    ++ R SV  +       +Q
Sbjct: 117 LLTELEKYPNVKIYFNHKLMSVSFEDERISVMNLITEEITTHQ 159


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 390 YPESAYDLIKRYYGFKVKHHKHY 458
           YP   Y+LI R Y   V +   Y
Sbjct: 252 YPAPLYELIDRKYDENVDYQVRY 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,758
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)