Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0329.Seq
         (744 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53181-7|AAA93487.1|  472|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical...    30   2.0  
AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    30   2.0  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    30   2.0  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>U53181-7|AAA93487.1|  472|Caenorhabditis elegans Hypothetical
           protein F36D4.4 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 604 FQRAACCSLRRPCWNRSRRSAEL 672
           F+R ACC+ RRP WNR++  +++
Sbjct: 339 FRRLACCNPRRP-WNRTKSFSQM 360


>AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.26 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 710 AAWRDPSMSKMTNSSADLRLRFQHGRLKEQHAAL*KPRPANIYYASISFQVPRRAPSART 531
           A W+    S+ T+  ++ RLR    R KE+ A++ +   A + Y    +   +R   A+T
Sbjct: 58  AVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKRVWMKKKRNEVAKT 117


>AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.7 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 710 AAWRDPSMSKMTNSSADLRLRFQHGRLKEQHAAL*KPRPANIYYASISFQVPRRAPSART 531
           A W+    S+ T+  ++ RLR    R KE+ A++ +   A + Y    +   +R   A+T
Sbjct: 58  AVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKRVWMKKKRNEVAKT 117


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 710 AAWRDPSMSKMTNSSADLRLRFQHGRLKEQHAAL*KPRPANIYYASISFQVPRRAPSART 531
           A W+    S+ T+  ++ RLR    R KE+ A++ +   A + Y    +   +R   A+T
Sbjct: 58  AVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKRVWMKKKRNEVAKT 117


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 710 AAWRDPSMSKMTNSSADLRLRFQHGRLKEQHAAL*KPRPANIYYASISFQVPRRAPSART 531
           A W+    S+ T+  ++ RLR    R KE+ A++ +   A + Y    +   +R   A+T
Sbjct: 58  AVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKRVWMKKKRNEVAKT 117


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 710 AAWRDPSMSKMTNSSADLRLRFQHGRLKEQHAAL*KPRPANIYYASISFQVPRRAPSART 531
           A W+    S+ T+  ++ RLR    R KE+ A++ +   A + Y    +   +R   A+T
Sbjct: 58  AVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKRVWMKKKRNEVAKT 117


>Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical
           protein F47G4.4 protein.
          Length = 722

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -1

Query: 663 RSATPVPTWPPQ--GTTRSPLKTSSSEHLLCFH--FFPSSKTSTLRPH*SLVGSTVA 505
           RS TPV T PP+  GT +S +  SS   L  ++    PS   S LR   S+ GST +
Sbjct: 395 RSVTPVSTKPPRTFGTAKSVI-VSSKPSLSGYNNRANPSPSMSDLRTTKSMAGSTTS 450



 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 675 EQLRRSATPVPTWPPQGTTRSPLKTSSSEHLLCFHFFPSSKTSTLRP 535
           E+   SA+PV +     +  SP+K +  +H       P   T TL P
Sbjct: 342 EETETSASPVNSSSSHSSPTSPVKPAPVKHRSASQKLPGKSTKTLNP 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,430,657
Number of Sequences: 27780
Number of extensions: 333262
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)