Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0328.Seq
         (399 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D568FF Cluster: PREDICTED: similar to CG8715-PA,...    34   1.2  
UniRef50_Q86S05 Cluster: Lingerer protein type2; n=5; Sophophora...    33   1.6  
UniRef50_A1CTM1 Cluster: Ubiquitin-protein ligase Ufd4, putative...    33   2.1  
UniRef50_Q9DW98 Cluster: PR103; n=1; Rat cytomegalovirus Maastri...    32   3.6  
UniRef50_A5KCH2 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_A5K5H0 Cluster: Putative uncharacterized protein; n=1; ...    32   3.6  
UniRef50_A0Z4X2 Cluster: LytB protein; n=1; marine gamma proteob...    31   6.3  
UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmo...    31   6.3  
UniRef50_Q9M999 Cluster: F27J15.24; n=13; Eukaryota|Rep: F27J15....    31   8.3  
UniRef50_Q570L2 Cluster: Putative translation initiation factor ...    31   8.3  
UniRef50_A5K5Y6 Cluster: RAD protein; n=1; Plasmodium vivax|Rep:...    31   8.3  

>UniRef50_UPI0000D568FF Cluster: PREDICTED: similar to CG8715-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG8715-PA, isoform A - Tribolium castaneum
          Length = 1074

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +3

Query: 261 VLELMEMTCRTEDEVCSALHDTXXXXXXXXXXXXXXSQRIQGEWQT 398
           V +LMEM+ R+E+EVC ALHD                   QGEW+T
Sbjct: 56  VKKLMEMSQRSEEEVCLALHD--CDYDENAAMNMLLENMGQGEWET 99


>UniRef50_Q86S05 Cluster: Lingerer protein type2; n=5;
           Sophophora|Rep: Lingerer protein type2 - Drosophila
           melanogaster (Fruit fly)
          Length = 1375

 Score = 33.5 bits (73), Expect = 1.6
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +1

Query: 103 AKGKEGKHAADKGKGADRPQPKEKAKPQATTEQLRMAHM 219
           A GK+G   A K    D+P   EKA+P+ATTEQLR+A +
Sbjct: 43  AAGKKGGQDASK---TDKP---EKAQPKATTEQLRIAQI 75


>UniRef50_A1CTM1 Cluster: Ubiquitin-protein ligase Ufd4, putative;
            n=7; Pezizomycotina|Rep: Ubiquitin-protein ligase Ufd4,
            putative - Aspergillus clavatus
          Length = 1817

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 109  GKEGKHAADKGKGADRPQPKEKAKP 183
            G EG  A DK   A+RP P  +AKP
Sbjct: 1047 GHEGSRAPDKSSSAERPDPASRAKP 1071


>UniRef50_Q9DW98 Cluster: PR103; n=1; Rat cytomegalovirus
           Maastricht|Rep: PR103 - Rat cytomegalovirus (strain
           Maastricht)
          Length = 377

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +1

Query: 79  GARATKCGAKGKEGKHAADKGKGADRPQPKEKAKPQATTEQLR 207
           G+  T  G +G EG      G G  RPQP  +  P+   E  R
Sbjct: 272 GSTGTGTGTEGSEGGREVGSGSGDGRPQPAPRPDPRNKKETRR 314


>UniRef50_A5KCH2 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2062

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 106  KGKEGKHAADKGKGADRPQPKEKAKPQATTE 198
            K K+ K    KGKG ++ + KEKAKP+A ++
Sbjct: 1077 KKKKPKEGEAKGKGKEKEKEKEKAKPKAKSK 1107


>UniRef50_A5K5H0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 890

 Score = 32.3 bits (70), Expect = 3.6
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 296 FSPTGHLH*LQDHSRTSDESSLLRSIICAIRSCS 195
           F P+G LH    H    DE  +L+ +I  +RSCS
Sbjct: 686 FPPSGELHLNGQHHHPLDEQDILKGLINQMRSCS 719


>UniRef50_A0Z4X2 Cluster: LytB protein; n=1; marine gamma
           proteobacterium HTCC2080|Rep: LytB protein - marine
           gamma proteobacterium HTCC2080
          Length = 249

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +1

Query: 136 KGKGADRPQPKEKAKPQATTEQLRMAHMIDRK 231
           K K   +P+PK K KPQATTE +  A   ++K
Sbjct: 76  KPKPKPKPKPKPKPKPQATTEPIPAAVTPEQK 107


>UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8;
           Plasmodium (Vinckeia)|Rep: RNB-like protein, putative -
           Plasmodium yoelii yoelii
          Length = 2804

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 106 KGKEGKHAADKGKGADRPQPKEKAKPQATTEQLR 207
           KGK+ K    KGKG +    KEK+K +  T +L+
Sbjct: 386 KGKKNKKKIKKGKGDENKDTKEKSKKEDETYELK 419


>UniRef50_Q9M999 Cluster: F27J15.24; n=13; Eukaryota|Rep: F27J15.24
           - Arabidopsis thaliana (Mouse-ear cress)
          Length = 756

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +1

Query: 85  RATKCGAKGKEGKHA-----ADKGKGADRPQPKEKAKPQATTEQLRMAHMIDRK 231
           RA K  AKG+  + A     A+ GK A +PQPK++  P  ++   + A  ++++
Sbjct: 308 RAAKAAAKGEGSRRADESGRANPGKAAIKPQPKKERLPVTSSVSEKTAVAVEKE 361


>UniRef50_Q570L2 Cluster: Putative translation initiation factor
           eIF-2B delta subunit; n=2; Arabidopsis thaliana|Rep:
           Putative translation initiation factor eIF-2B delta
           subunit - Arabidopsis thaliana (Mouse-ear cress)
          Length = 627

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +1

Query: 85  RATKCGAKGKEGKHA-----ADKGKGADRPQPKEKAKPQATTEQLRMAHMIDRK 231
           RA K  AKG+  + A     A+ GK A +PQPK++  P  ++   + A  ++++
Sbjct: 223 RAAKAAAKGEGSRRADESGRANPGKAAIKPQPKKERLPVTSSVSEKTAVAVEKE 276


>UniRef50_A5K5Y6 Cluster: RAD protein; n=1; Plasmodium vivax|Rep:
           RAD protein - Plasmodium vivax
          Length = 371

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 94  KCGAKGKEGKHAADKGKGADRPQPKEKAK 180
           K GAKG+E   A DKGK  D+ +  +K K
Sbjct: 230 KSGAKGEEKGKAPDKGKAPDKGKAPDKGK 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,220,700
Number of Sequences: 1657284
Number of extensions: 4970016
Number of successful extensions: 13752
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13700
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)