BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= tesV0328.Seq (399 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 28 2.8 Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical pr... 27 5.0 >Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical protein K12D12.3 protein. Length = 333 Score = 27.9 bits (59), Expect = 2.8 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 94 KCGAKGKEGKHAADKGKGADRPQPKEKAKPQ 186 K G G++G+ AD K RP PK + PQ Sbjct: 221 KQGPDGRQGEKGADGRKPIGRPGPKGQRGPQ 251 >Z81104-3|CAD89749.1| 660|Caenorhabditis elegans Hypothetical protein M199.5 protein. Length = 660 Score = 27.1 bits (57), Expect = 5.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 79 GARATKCGAKGKEGKHAADKGKGAD 153 GA T GAKG +G+ AD KGAD Sbjct: 409 GADGTP-GAKGDKGEKGADGAKGAD 432 Score = 27.1 bits (57), Expect = 5.0 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 79 GARATKCGAKGKEGKHAADKGKGAD 153 GA T GAKG +G+ AD KGAD Sbjct: 472 GADGTP-GAKGDKGEKGADGAKGAD 495 Score = 26.6 bits (56), Expect = 6.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 79 GARATKCGAKGKEGKHAADKGKGAD 153 GA T G+KG +G+ AD KGAD Sbjct: 250 GANGTP-GSKGDKGEKGADGAKGAD 273 Score = 26.2 bits (55), Expect = 8.7 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 Query: 79 GARATKCGAKGKEGKHAADKGKGAD 153 GA T GAKG +G AD KGAD Sbjct: 313 GADGTP-GAKGDKGDKGADGAKGAD 336 Score = 26.2 bits (55), Expect = 8.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 79 GARATKCGAKGKEGKHAADKGKGAD 153 GA T GAKG +G+ D KGAD Sbjct: 364 GANGTP-GAKGDKGEKGTDGAKGAD 387 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,435,649 Number of Sequences: 27780 Number of extensions: 114768 Number of successful extensions: 311 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 311 length of database: 12,740,198 effective HSP length: 74 effective length of database: 10,684,478 effective search space used: 619699724 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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