Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0327.Seq
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.37 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.64 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -1

Query: 480 YFTLEID*FVQFIDGLQLLHKLIA---FKSRIIKLFYVTIYDFATLFYILNYIFAVFVNR 310
           YFT+ +  +  FI  +  +H L+    F    I L  V  + +A + + ++ +F + +  
Sbjct: 78  YFTVHLLFYCPFI--IFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135

Query: 309 FRG*LFFYYAIFSFKFKITLFT 244
           F   LFF   I+ F     +FT
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFT 157


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 9/44 (20%), Positives = 24/44 (54%)
 Frame = +1

Query: 265 FKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 396
           FK+   ++ ++++ +   K C   + ++ K S+++   V  FN+
Sbjct: 191 FKQRYQLINEQMAVRINPKNCASFVIEVRKLSRLLGEMVGLFND 234


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 274 ENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 396
           ++ +V++ LS  PID   +   Q I+ S +  D+    F+N
Sbjct: 178 DHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 218


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 274 ENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNN 396
           ++ +V++ LS  PID   +   Q I+ S +  D+    F+N
Sbjct: 169 DHQIVDRLLSHAPIDSANQWYSQTIDNSYQFCDNLQYSFDN 209


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +1

Query: 283 VVEKKLS--TKPIDKYCKDIIQDI-EKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLN 453
           VV KK S  T P  ++  D++ D+ E+    ID       N+RF  DK+V   Q  + L 
Sbjct: 304 VVHKKCSNFTLPEIQHNLDVLVDMCEQDIIRID------RNTRFNQDKIVALRQEQETLK 357

Query: 454 ELVNFKGEIPEETLKEL 504
             V  + ++  ++LK++
Sbjct: 358 SQVQRESDV-VDSLKDV 373


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 304 TKPIDKYCKDIIQDIEKSSKVIDSHVK 384
           T P D Y  DIIQDI   + V+D   K
Sbjct: 107 TCPGDLYDSDIIQDIVPQN-VLDEEEK 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,218
Number of Sequences: 336
Number of extensions: 2733
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)