Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0327.Seq
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0384 - 8294914-8297817                                           31   1.3  
03_02_0050 + 5272471-5274861                                           29   3.9  
06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792...    29   5.1  
11_01_0165 - 1349319-1349399,1349523-1349609,1349691-1349809,134...    28   6.7  
03_02_0177 - 6185091-6185355,6185468-6185524,6185725-6186089,618...    28   6.7  

>09_02_0384 - 8294914-8297817
          Length = 967

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 334 IIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLN-ELVNFKGEIP 483
           I+QD  K SK +   +  FN SR  SDKL E +   D+ + E+V+  G +P
Sbjct: 88  ILQDYSKRSKHL---ISNFNISRRASDKLEELVDLYDRGSFEVVSVDGPLP 135


>03_02_0050 + 5272471-5274861
          Length = 796

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +1

Query: 433 QAVDKLNELVNFKGEIPEET 492
           +A+DKLNELV  KG +P+ET
Sbjct: 542 EAIDKLNELVE-KGLVPDET 560


>06_03_0038 -
           15778446-15778577,15778685-15779020,15779106-15779225,
           15779280-15779765,15779861-15779994,15780111-15780230,
           15784881-15785018,15785404-15786079,15786179-15786340,
           15786424-15786618,15786839-15787084,15787758-15787952
          Length = 979

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +1

Query: 274 ENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDS 375
           ++S++  +  T  I  Y K +++DI +  +VIDS
Sbjct: 223 KDSLIVDRCQTPRIQLYTKQLVEDISQEDRVIDS 256


>11_01_0165 -
           1349319-1349399,1349523-1349609,1349691-1349809,
           1349899-1350137,1350240-1350296,1350593-1350679,
           1350822-1350955,1350971-1351357
          Length = 396

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -1

Query: 351 FYILNYIFAVFVNRFRG*LFFYYAIFSFKFKITLFTATTVVVDSICELS 205
           F I N +   F   F   LF  + IF  +  + +FT +TVV D++ ELS
Sbjct: 239 FAIFNVVTTSFSIGFM--LFVLFLIFRGRL-VYIFTESTVVADAVAELS 284


>03_02_0177 -
           6185091-6185355,6185468-6185524,6185725-6186089,
           6186180-6186332,6186422-6186655,6190532-6190978,
           6191549-6191652,6192240-6192351
          Length = 578

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 261 KITLFTATTVVVDSICELSKNDT-LECL 181
           KIT F+AT  + + IC + +N T LECL
Sbjct: 382 KITGFSATRSLAELICHIMENTTSLECL 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,798,372
Number of Sequences: 37544
Number of extensions: 240570
Number of successful extensions: 608
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)