Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0327.Seq
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.8  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   4.3  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   7.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 105  GNLLKNQSRNKLLNLINQTDLNLEDED 185
            GN + N   NKL + +N   ++L+D+D
Sbjct: 1163 GNSISNHQDNKLDHELNHRGVSLQDDD 1189


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 2   PEEMQKRMEAMKIELINKIKNNDEPAPKKASALRR 106
           PE    R++ +K +   K    +EP  K+A+ LR+
Sbjct: 110 PENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQ 144


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
 Frame = -1

Query: 396 IIKLFYVTIYDFATLFYI---LN-YIFAVFVNRFR 304
           I+KLF +T Y    L+Y+   +N  ++ +  N+FR
Sbjct: 306 ILKLFIITTYISGILYYLSTCINPLLYNIMSNKFR 340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,825
Number of Sequences: 2352
Number of extensions: 9961
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)