BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0327.Seq
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 30 7.5
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 30 7.5
BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for IM... 30 7.5
AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens ... 30 7.5
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 30 7.5
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 30 7.5
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 460 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 517
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 460 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 517
>BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for
IMAGE:3914496) protein.
Length = 638
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 447 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 504
>AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ30873 fis, clone FEBRA2004325, moderately
similar to Canis familiaris mRNA for C3VS protein. ).
Length = 634
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 447 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 504
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 460 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 517
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 30.3 bits (65), Expect = 7.5
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +1
Query: 262 KFKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQ 435
+ K +N + K K + C+ + +D ++ K ++ +K +ES+ V+Q+Q
Sbjct: 460 RLKLQNELAHKVAECKALALECERVKEDSDEQIKQLEDALKDVQKRMYESEGKVKQMQ 517
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,382,107
Number of Sequences: 237096
Number of extensions: 1355027
Number of successful extensions: 2384
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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