Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0327.Seq
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.21
U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine rece... 31 0.85
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical pr... 30 1.5
U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical p... 29 4.5
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 28 6.0
U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g ... 28 6.0
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine re... 28 7.9
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 316 DKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLNE 456
+K ++Q +E+S + + + E+ K+VEQL+ V +LNE
Sbjct: 282 EKESAQLLQQLEESRAALRDEQRHLEHQEAENGKIVEQLKTVSELNE 328
>U80030-8|AAG24166.2| 375|Caenorhabditis elegans Serpentine
receptor, class w protein112 protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = -1
Query: 387 LFYVTIYDFATLFYILNYIFAVFVNRFRG*LFFYYAIFSFKFKITLFTATTVVVDSICEL 208
+FY+ + A +FYILN I + + + + Y F F F TL TATT + IC L
Sbjct: 283 IFYIGEFPMA-VFYILNPILQMSI---QWGFYTYLVYFEFLFS-TLLTATTAIHMPICLL 337
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 262 KFKRENSVVEK-KLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNSRFESDKLVEQLQA 438
K+ N E+ K+ T+ ++ D++++ ++ ++Q + + ES K VEQL+A
Sbjct: 17 KYDHLNEDYERIKIRTESLENRLLDVVEENDRKDNENSERIRQLDEALKESQKRVEQLEA 76
>Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical
protein H12I19.1 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 456 FVQFIDGLQLLHKLIAFKSRIIKLFYVTIYDFATLFYILNYIFAVFVNR 310
F Q + L K I + ++ + YV I+ LFYIL + F V+VN+
Sbjct: 3 FSQVFENQNFLAKFID-EGILLSVLYVLIFIILFLFYILVFPFYVYVNK 50
>U64843-13|AAF98228.1| 355|Caenorhabditis elegans Hypothetical
protein K06C4.8 protein.
Length = 355
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 399 RIIKLFYVTIYDFA-TLFYILNYIFAVFVNRFRG*LFFYYAIFSFKFKITLFTATT 235
+ I LF F +F I+++I V + + FF Y IFS K++ L T T
Sbjct: 264 KFINLFSHNYVQFQFVIFKIIHHISNVLLVFYSASTFFIYLIFSEKYRNVLSTCVT 319
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 265 FKRENSVVEKKLSTKPIDKYCKDIIQDIEKSSKVIDSHVKQFNNS 399
+K E S K +P+ YC+DI + I + + H K+FN +
Sbjct: 205 YKEERSRKNKD-DREPVVSYCRDIKEHIARMERGQIKHGKEFNKN 248
>U32305-8|AAK18853.4| 492|Caenorhabditis elegans Regulator of g
protein signalingprotein 5 protein.
Length = 492
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 268 KRENSVVEKKLSTKPIDKYCKDIIQDIEKS 357
++ +V+ KLS P+ K C D QD KS
Sbjct: 156 RKIKQIVDDKLSASPLQKSCFDEAQDFVKS 185
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = +2
Query: 155 SDRPKSRGRRHSNVSFLESSQIESTTTVVAVNNVILNLKEKIA**KKSYPRNLLTNTA 328
+D K R+ ++SF+E+S +++T A N++ + + ++ K + ++ +TA
Sbjct: 131 TDEAKIYAERN-HISFIETSALDNTNVEAAFTNIVTEIYKLVSEKYKDHSGTIIPSTA 187
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 283 VVEKKLSTKPIDKYCKDIIQDIEK-SSKVIDSHVKQFNNSRFESDKLVEQLQAVDKLNEL 459
+VE +L TK +DK C+ +++ E+ +++ + + +L EQ + + +++
Sbjct: 2 IVEDRLKTKALDKKCRVLVEQNEQLMARLCELEMSHGGADETRERRLAEQEERIRQISSA 61
Query: 460 VNFKGEI 480
+ + ++
Sbjct: 62 LESERDV 68
>AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine
receptor, class w protein144 protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -1
Query: 456 FVQFIDGLQLLHKLIAFKSRIIKLFYVTIYDFATLFYILNYIF 328
F+ L L+HK + S I + ++ I+D ++FY + ++
Sbjct: 49 FINIFHFLILIHKPLRSSSINIIMAFIAIFDICSMFYKMKQVY 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,793,511
Number of Sequences: 27780
Number of extensions: 249547
Number of successful extensions: 777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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