Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0326.Seq
(735 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 126 6e-28
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 122 1e-26
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 115 1e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 113 4e-24
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 109 5e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 103 3e-21
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 101 1e-20
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 101 2e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 100 4e-20
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 99 6e-20
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 98 2e-19
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 94 3e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 93 5e-18
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 8e-17
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 85 1e-15
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 85 2e-15
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 77 6e-13
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 74 3e-12
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 58 2e-07
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 58 3e-07
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 57 5e-07
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 53 8e-06
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 51 3e-05
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 50 6e-05
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 49 1e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 48 3e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 47 4e-04
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 43 0.009
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 41 0.036
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.26
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 38 0.34
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 37 0.45
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 36 0.78
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 36 0.78
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 36 1.0
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.4
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.4
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 36 1.4
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 34 3.1
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 4.2
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 5.5
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 5.5
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 7.3
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 7.3
UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.3
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 33 9.6
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 33 9.6
UniRef50_Q62A13 Cluster: Putative uncharacterized protein; n=3; ... 33 9.6
UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber... 33 9.6
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 9.6
UniRef50_Q555C4 Cluster: Putative uncharacterized protein; n=2; ... 33 9.6
UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=... 33 9.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 126 bits (304), Expect = 6e-28
Identities = 68/157 (43%), Positives = 77/157 (49%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFPWL*PTKSRRSTRPNRLSSS*GAFKAWSEY 613
++GH IE P P + K + KAW++
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
Query: 614 P*GXXXXXXXXXXXXKCATXXXXXXRXPSIIFNKGSG 724
K R P II+N+ +G
Sbjct: 181 K-KVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 252 HK 257
H+
Sbjct: 60 HQ 61
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 122 bits (293), Expect = 1e-26
Identities = 56/91 (61%), Positives = 61/91 (67%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
Q++GH+I+ FP
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFP 154
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +3
Query: 66 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 245
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 246 AGHK 257
AGH+
Sbjct: 61 AGHQ 64
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/63 (57%), Positives = 46/63 (73%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+ E PLVV+D+VQ++ KTKQAVIFLRRL+ I + QR RAG+G MR+RRRI R+
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQ-KVYKSQRFRAGRGTMRDRRRIARR 208
Query: 691 GXL 699
G L
Sbjct: 209 GPL 211
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 115 bits (277), Expect = 1e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 99 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGH+
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 113 bits (272), Expect = 4e-24
Identities = 52/91 (57%), Positives = 55/91 (60%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 37 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQK 96
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH + P P
Sbjct: 97 RFATASALAASGSPALLMARGHNVSTVPEVP 127
Score = 43.2 bits (97), Expect = 0.007
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +1
Query: 511 IPELPLVVADKV---QEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRI 681
+PE+PLV++ I KT AV L+ + G + + ++LRAGKGK+R RR
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAV-GAGADCEKAKNSRKLRAGKGKLRGRRHK 181
Query: 682 QRKGXL 699
QR+G L
Sbjct: 182 QRRGPL 187
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 109 bits (263), Expect = 5e-23
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 60 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGH+
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
Score = 39.5 bits (88), Expect = 0.084
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 508 KIPELPLVVADKVQE---INKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRR 678
++ E+PLV+ +V E I +T A L+ + + + + ++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVE-KVKDSRKLRAGKGKLRGRRH 203
Query: 679 IQRKGXL 699
QR+G L
Sbjct: 204 RQRRGPL 210
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 103 bits (248), Expect = 3e-21
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
G +TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 252 HK 257
++
Sbjct: 60 YE 61
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRR 675
+ E+PLV ++ ++ + KTK A+ FL L G+ R +LRA GKMRNR+
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISL-GLRDEVNRLIKSXKLRARXGKMRNRK 200
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 101 bits (243), Expect = 1e-20
Identities = 52/103 (50%), Positives = 55/103 (53%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 398 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
RRWH ARGH I + P P
Sbjct: 110 RRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQVPQIP 152
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 87 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAG 60
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQR 687
++P++PLVV DK++ KT A+ FL+R + + S + +RAG K R ++ R
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQ-KVVSTKVVRAGISKQRGKKYRVR 205
Query: 688 KGXL 699
KG L
Sbjct: 206 KGPL 209
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 101 bits (241), Expect = 2e-20
Identities = 46/103 (44%), Positives = 56/103 (54%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + G+ QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGY-QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 398 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
R WH +RGH +E P P
Sbjct: 108 RHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVESVPELP 150
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +3
Query: 78 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G++
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 100 bits (239), Expect = 4e-20
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = +2
Query: 260 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 439
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 440 XXXXXXXXXXXXXXXQARGHIIERFPSFP 526
+RGH I P P
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVP 150
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+PE+PLVV D +Q KTK+A+ FL+ + + ++ R + +RAG+GKMRNRR + R+
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVN-RVNDSREIRAGRGKMRNRRYVARR 204
Query: 691 GXL 699
G +
Sbjct: 205 GPM 207
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 99 bits (238), Expect = 6e-20
Identities = 46/103 (44%), Positives = 58/103 (56%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + + G+ QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGY-QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 398 RRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
RRWH +RGH IE P
Sbjct: 108 RRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEALREVP 150
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +3
Query: 84 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G++
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 98.3 bits (234), Expect = 2e-19
Identities = 48/91 (52%), Positives = 51/91 (56%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
Q SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 62 QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEK 121
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH I P P
Sbjct: 122 RHAVAAAIAATGCPSLVMARGHRINNVPELP 152
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 252 HK 257
H+
Sbjct: 61 HQ 62
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRL-QGMV*ISLRCTSXQRLRAGKGKMRNRRRIQR 687
+PELPLV+++++Q INKT AV F + +G+ R S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 688 KGXL 699
G L
Sbjct: 208 VGPL 211
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 94.3 bits (224), Expect = 3e-18
Identities = 42/92 (45%), Positives = 52/92 (56%)
Frame = +2
Query: 257 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 436
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRK 116
Query: 437 XXXXXXXXXXXXXXXXQARGHIIERFPSFPWL 532
+RG+ ++ P P++
Sbjct: 117 SAIFSAIASSSIVSIIVSRGYRVKTIPEIPFV 148
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
IPE+P V+ D +++I KT+ + L L G+ I +R ++L++GKGKMRNRR +
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSI-VRNKLKRKLKSGKGKMRNRRFKKPT 199
Query: 691 GXL 699
G L
Sbjct: 200 GPL 202
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 93.5 bits (222), Expect = 5e-18
Identities = 43/91 (47%), Positives = 49/91 (53%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
Q SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 61 QHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQR 120
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH I+ P P
Sbjct: 121 RFAMCSAIAASSNPSLVLARGHKIDNVPELP 151
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+PELPLVV+D V++I KTK+AV L L+ + S +R+R G GK RNRR QR+
Sbjct: 147 VPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAES-KRIRVGSGKARNRRYTQRR 205
Query: 691 GXL 699
G L
Sbjct: 206 GVL 208
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 90 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGH+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.4 bits (212), Expect = 8e-17
Identities = 44/91 (48%), Positives = 49/91 (53%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTK 117
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
+ARGH I P
Sbjct: 118 KIAEAMAVAASAQASLVEARGHRISDVKMLP 148
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/60 (48%), Positives = 36/60 (60%)
Frame = +1
Query: 520 LPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGXL 699
LP++V+D + + KTK AV LR L M R + +R GKGKMRNRR QRKG L
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLN-MTEELKRVEKSRGVRCGKGKMRNRRYTQRKGIL 205
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 93 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAG 56
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/63 (66%), Positives = 51/63 (80%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+ E+PLVV+DK+QEINKTKQAVIFLRR++ + L+ QRLRAGKGKMRNRRR+ RK
Sbjct: 12 VSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDV-LKVYKSQRLRAGKGKMRNRRRLHRK 70
Query: 691 GXL 699
G L
Sbjct: 71 GPL 73
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/98 (44%), Positives = 52/98 (53%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFPWL*PTKS 547
ARGH I P P + +KS
Sbjct: 121 RFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 499 HY*KIPELPLVVADK-VQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRR 675
H +P++PLVV K + I KTKQAV L+++ + L+ + + +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDV-LKVIASKTVRAGQGKMRGRK 201
Query: 676 RIQRKGXL 699
+RKG L
Sbjct: 202 IKERKGPL 209
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAG 59
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +2
Query: 251 SQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 430
+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKV 120
Query: 431 XXXXXXXXXXXXXXXXXXQARGHIIERFPSFPWL 532
+RGH ++ +FP +
Sbjct: 121 KVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMI 154
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/91 (39%), Positives = 44/91 (48%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQR 117
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
QARGH++ P
Sbjct: 118 KFAIASAIAATAVVPLVQARGHVLGEVKEVP 148
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +3
Query: 78 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG K
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQR 687
++ E+P+VV D VQEI +T+ AV L+++ G+ R R+ KGK R +
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKV-GVYGDVQRVLDGSVHRSSKGKFRRAAYKTK 201
Query: 688 KGXL 699
KG L
Sbjct: 202 KGPL 205
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 58.4 bits (135), Expect = 2e-07
Identities = 37/103 (35%), Positives = 44/103 (42%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQR 110
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFPWL*PTKSRRSTR 562
+ARGH I PS P + T + T+
Sbjct: 111 RYAVASALAASANAALVEARGHRIADVPSIPLVVDTDNVTKTK 153
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+P +PLVV + KTK A+ ++ + G++ RC + +RAG+GKMRNRR I RK
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAV-GVLRDVERCKDSRHIRAGRGKMRNRRYITRK 193
Query: 691 GXL 699
G L
Sbjct: 194 GPL 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +3
Query: 87 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAG 55
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+PE+PLVV D I KT +AV L++L I + + + +R+GKGKMRNRR +QR+
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIE-KVKASRNVRSGKGKMRNRRYVQRR 208
Query: 691 GXL 699
G L
Sbjct: 209 GPL 211
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 129 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 215
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRN 669
++PELPLVV DKV+ KT++AV+ L++L+ I + + QR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIK-KVYASQRMRAGKGKMRN 61
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+PELPLV+ D + + KT A+ L++ + + + GKGKMRNRR I RK
Sbjct: 10 VPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTE-KAKDSHAIHPGKGKMRNRRYISRK 68
Query: 691 GXL 699
G L
Sbjct: 69 GPL 71
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 541 KVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKG 693
KV+ KTK+ V+ L++L+ I + + QR+RAGKGKMRNRR IQR+G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIK-KVYASQRMRAGKGKMRNRRPIQRRG 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +2
Query: 194 SRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 322
S + + + + E G+ QTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGY-QTSAESWGTGRARGPMPRVRGGG 73
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 177 DLVNDVHVSMSKNSRQPYCVSKEAGHK 257
D+VN VH ++ KN QPY VS+ AG++
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 50.0 bits (114), Expect = 6e-05
Identities = 30/96 (31%), Positives = 40/96 (41%)
Frame = +2
Query: 239 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 418
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 419 XXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
ARGH++E+ PS P
Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLP 168
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQR 687
K+P LP+VV ++IN+ K+A L G+ R ++RAGKGKMR RR +
Sbjct: 163 KVPSLPVVVVGDAEKINRAKEAKKLFEAL-GLWPDVERAAEGVKIRAGKGKMRGRRYKEP 221
Query: 688 KGXL 699
K L
Sbjct: 222 KSVL 225
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +1
Query: 517 ELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGX 696
+LP+VV D V+ INKTK A+ L+ L G+ R + +RAG+GKMR RR Q K
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNL-GVYEDIERSREGKHIRAGRGKMRGRRYKQPKSV 198
Query: 697 L 699
L
Sbjct: 199 L 199
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 511 IPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRK 690
+P LP+VV D+++ +NK ++ F + + G+ R S +R+RAGKGK R RR ++ K
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSV-GLWADVERAKSNRRIRAGKGKRRGRRYVKPK 199
Query: 691 GXL 699
L
Sbjct: 200 SVL 202
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXX 430
+TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKE 113
Query: 431 XXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
+ RGH+I+ P P
Sbjct: 114 RRAALRSALAATAKPEFVKERGHVIDDVPHLP 145
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 87 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFR 55
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 47.2 bits (107), Expect = 4e-04
Identities = 29/74 (39%), Positives = 34/74 (45%)
Frame = +1
Query: 202 LCPRTRGSPTA*ARRLVTNQCRIMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVR 381
L P RG P L ++G+R C SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPVRHEPLGA----LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 382 PHEALAALAPSRQP 423
E L LAP QP
Sbjct: 155 ADEDLPPLAPQDQP 168
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 517 ELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGX 696
ELP VV+++++ + +TK R + G+ R +R RAG+GKMR RR +++K
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAI-GVYADVERAKERKRYRAGRGKMRGRRYVKKKSV 194
Query: 697 L 699
L
Sbjct: 195 L 195
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 40.7 bits (91), Expect = 0.036
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 197 RFYVQELEAALL---REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 367
R ++ E A L R+ +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 368 GRMFAPTK 391
GR P +
Sbjct: 101 GRAAHPPR 108
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 387 VGANIRPPRHMLPKAP*P 334
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 37.5 bits (83), Expect = 0.34
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQR 687
++ ++P V+ D+++ + TK+ + L G++ +R +++++GKGK+R R+
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDL-GIMDDIVRAKKGRKIKSGKGKLRGRKYRTP 194
Query: 688 KGXL 699
KG L
Sbjct: 195 KGPL 198
Score = 36.3 bits (80), Expect = 0.78
Identities = 24/93 (25%), Positives = 37/93 (39%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 433
+T+AES+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKER 110
Query: 434 XXXXXXXXXXXXXXXXXQARGHIIERFPSFPWL 532
+ RGH + P++
Sbjct: 111 TLAIRSAIAATANKELVEQRGHQVSELEQIPFV 143
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 37.1 bits (82), Expect = 0.45
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3
Query: 490 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 389
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 36.3 bits (80), Expect = 0.78
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 532 VADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGXL 699
V DK++ KTK A+ FL+R + + S + +RAG K R ++ RKG L
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQ-KVVSTKTIRAGVSKSRGKKYRVRKGPL 55
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 523 PLVVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGXL 699
P+VV D + + T + FL+++ G+ R R+RAGKGKMR R+ + G L
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKI-GVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPL 204
Score = 34.3 bits (75), Expect = 3.1
Identities = 25/98 (25%), Positives = 38/98 (38%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHX 412
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXQARGHIIERFPSFP 526
+ARGH+ + FP
Sbjct: 110 EANVKEKRLAVISALSATADIAFVRARGHVFKDSVRFP 147
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = +2
Query: 278 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 457
TG ARI R++GGG R G+ RGGR P K + H
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124
Query: 458 XXXXXXXXXQARGHIIE 508
RGHII+
Sbjct: 125 AATASKSTVAGRGHIID 141
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 350 RRHPDRTYGYHHHGHAEFGQQHVR-YP 273
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 293 ARIPRVRGGGTHRSGQGAFGNMCRGG 370
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 529 VVADKVQEINKTKQAVIFLRRLQGMV*ISLRCTSXQRLRAGKGKMRNRRRIQRKGXL 699
+V D ++++ KTK+ L +L G+ R +R RAGKGK R R I+RKG L
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKL-GLEKELERVYEIKR-RAGKGKRRGRAYIERKGPL 208
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 365 HDTCYRRHPDRTYGYHHHGHAEFG 294
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 377 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIR 264
+Y H + RH R+YG+ HH H + R P +R
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVR 127
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 365 HDTCYRRHPDRTYGYHHHGHAEFGQQH 285
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.5 bits (73), Expect = 5.5
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 215 LEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 337
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 5.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 366 PRHMLPKAP*PDLWVPPPR 310
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 7.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 368 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 288
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.1 bits (72), Expect = 7.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 209 QELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 322
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 273
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 337
G WS+ AE G G AV R RV GGG G
Sbjct: 165 GSWSRPGAERRGAGMAVEREERVLGGGREVDG 196
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 32.7 bits (71), Expect = 9.6
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 400
R QGG A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 32.7 bits (71), Expect = 9.6
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 374 YVHHD-TCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRH 261
Y H+D Y +H D + HHHG +G H + H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_Q62A13 Cluster: Putative uncharacterized protein; n=3;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 266
Score = 32.7 bits (71), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -1
Query: 360 HMLPKAP*PDLWVPPPRTRGIRATARPVPHDSALVCDQPP 241
H L + P L P R G A+A P P DS + C PP
Sbjct: 200 HALTRDREPSLAAAPRRANGSPASAPPAPADSPIPCAAPP 239
>UniRef50_Q2S0X7 Cluster: Sensor protein; n=1; Salinibacter ruber
DSM 13855|Rep: Sensor protein - Salinibacter ruber
(strain DSM 13855)
Length = 942
Score = 32.7 bits (71), Expect = 9.6
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 396 GGAGTVASTSDSGERPWQQPLLLLASQRSFRLEDTLL 506
GG GTV +T +G RP PL+LLAS + + +T+L
Sbjct: 146 GGGGTVLATL-TGPRPETSPLILLASMGTIAVVETVL 181
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 32.7 bits (71), Expect = 9.6
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 62 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRFYVQELEAALLREQ 241
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 379
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_Q555C4 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 254
Score = 32.7 bits (71), Expect = 9.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 344 HPDRTYGYHHHGHAEFGQQHVRYPMIRHWFVTSLLAHAVGLPRVL 210
H +G HHGH FG H + + W V S + H + +VL
Sbjct: 149 HHGHHFGGGHHGH-HFGGHHGHHDAMNDWSVQSKINHLISKKQVL 192
>UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=2;
Eutheria|Rep: Chromosome 1 open reading frame 122 - Homo
sapiens (Human)
Length = 159
Score = 32.7 bits (71), Expect = 9.6
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 406
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,766,303
Number of Sequences: 1657284
Number of extensions: 14731828
Number of successful extensions: 50447
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 46463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50052
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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