Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0325.Seq
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 63 2e-10
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 58 9e-09
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 55 5e-08
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 55 6e-08
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 54 1e-07
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 54 1e-07
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 52 4e-07
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 49 3e-06
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 49 3e-06
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 49 4e-06
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 42 6e-04
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 42 6e-04
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 40 0.002
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 38 0.008
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 35 0.053
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 35 0.070
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 34 0.093
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 33 0.28
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 31 0.86
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 31 1.1
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 31 1.1
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 31 1.1
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 31 1.1
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 29 2.6
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 29 4.6
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 28 6.1
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 68.9 bits (161), Expect = 4e-12
Identities = 31/59 (52%), Positives = 45/59 (76%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRG 654
K++ +K + + HPDKNPD +++ FK+IS+AYEVLSDE+KR++YDQ G+E L G G
Sbjct: 23 KKAYRKMALKFHPDKNPDGAEQ----FKQISQAYEVLSDEKKRQIYDQGGEEALQGGGG 77
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 431 YYRVLGVTRTATDTEIKKAYR 493
YY VLGV A+D E+KKAYR
Sbjct: 7 YYDVLGVKPDASDNELKKAYR 27
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/57 (49%), Positives = 44/57 (77%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNG 648
K++ +K + + HPDKN + A +FKEI+EAY+VLSD++K+++YDQ+G+EGL G
Sbjct: 21 KKAYRKMALKYHPDKNKEAG--AENKFKEIAEAYDVLSDDKKKKIYDQFGEEGLKEG 75
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
DYY+VLG+++ ATD EIKKAYR
Sbjct: 4 DYYKVLGISKGATDDEIKKAYR 25
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRGR 657
K++ +K + E HPD+N D+ + AN +F+++S AYEVLSD+ KR +YD++G+EG+ G
Sbjct: 41 KKAYRKLAKELHPDRNQDD-EMANEKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGG 99
Query: 658 RSAADEDYEFGYASF 702
+ + + F
Sbjct: 100 GGGGHDPFSSFFGDF 114
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
D+Y++LGV + A +IKKAYR
Sbjct: 24 DFYKILGVAKNANANQIKKAYR 45
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNG 648
K+S K + E HPDKNPD+ D +FKEIS AYEVLS KRR+YD G EG+ G
Sbjct: 30 KKSYFKLAKEYHPDKNPDHGD----KFKEISFAYEVLSSPEKRRLYDARGLEGVQGG 82
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/57 (42%), Positives = 43/57 (75%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNG 648
+++ +K + ++HPD+N D+ + A+ F +I++AYEVL DE R+ YDQ+G++GL +G
Sbjct: 37 RKAFKKLAIKKHPDRNTDDPN-AHDEFVKINKAYEVLKDENLRKKYDQFGEKGLEDG 92
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
DYY +LGV R A D I+KA++
Sbjct: 20 DYYELLGVERDADDRTIRKAFK 41
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYD 618
K + K S + HPD NP N +EA ++F +++ AYE+LS E KR+ YD
Sbjct: 41 KSAYYKLSKQHHPDTNPTNKEEAAKKFHQVAMAYEILSSEDKRKAYD 87
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAY 490
D+Y+VLG+ ++A+ +IK AY
Sbjct: 24 DHYKVLGLAQSASQKDIKSAY 44
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGL 639
K++ +K + HPDKN D E FKEI+ A VLS+ KRRVYD+ G+ GL
Sbjct: 55 KKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRVYDEMGETGL 108
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 434 YRVLGVTRTATDTEIKKAYR 493
Y VLG+ + ATD EIKKAYR
Sbjct: 40 YNVLGIQKNATDDEIKKAYR 59
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGR 651
K++ +K + + HPDKNPD +E ++F+ + AY+VLSD R+R YD++ +E + G+
Sbjct: 45 KKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPREREFYDRH-RESILKGK 101
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGK-EGLNNGRG 654
K++ + + + HPD N + EA +F+EISEAYEVLSD+ KR+ YD YG G GRG
Sbjct: 61 KKAYFQLAKKYHPDVN--KTKEAQTKFQEISEAYEVLSDDTKRQEYDAYGSGGGPAGGRG 118
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGK-EGLNNGRG 654
K++ + + + HPD N + EA +F+EISEAYEVLSD+ KR+ YD YG G GRG
Sbjct: 61 KKAYFQLAKKYHPDVN--KTKEAQTKFQEISEAYEVLSDDTKRQEYDAYGSGGGPAGGRG 118
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNS--DEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGR 651
K++ +K + + HPDK+ D+ +EA ++FK+I++AYE+L+D++KR D+ GL+ R
Sbjct: 24 KKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILTDKKKRADLDRTENPGLHRRR 83
Query: 652 GRRSAADEDYEFGYASFPFHIPR 720
+ PF I R
Sbjct: 84 STPGGMHRMHSHDMFRSPFDIFR 106
Score = 31.9 bits (69), Expect = 0.49
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +2
Query: 434 YRVLGVTRTATDTEIKKAYRXXXXXXXXXXXXXXXXXXXEDSKKFLKLMRFFQMRENAEC 613
Y LG++ T+ D EIKKAYR E +KF K+ + +++ + +
Sbjct: 9 YITLGISSTSDDVEIKKAYR-KLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILTDKKK 67
Query: 614 MTSTARKD*ITEGVVALPQTRTTNLAMXA--SHFTFRDPEEVFXE 742
R TE L + R+T M SH FR P ++F E
Sbjct: 68 RADLDR----TEN-PGLHRRRSTPGGMHRMHSHDMFRSPFDIFRE 107
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYG 627
K + +K + + HPD+NP N A FK++S AY VLSD KRR YD G
Sbjct: 34 KSAYRKLALKYHPDRNP-NDAHAQEEFKKVSIAYSVLSDPNKRRQYDVSG 82
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 425 VDYYRVLGVTRTATDTEIKKAYR 493
+D+Y++LGV + A++ EIK AYR
Sbjct: 16 MDFYQLLGVEKMASEAEIKSAYR 38
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNN---- 645
++ +K + + HPDK + A FK + AY VLSD KRR YDQYG E N+
Sbjct: 154 RKEYRKLALKLHPDKC--RAPHATEAFKALGNAYAVLSDTDKRRQYDQYGAEAANSHTPT 211
Query: 646 ----GRGRRSAADEDYEFGY 693
G G + + DY G+
Sbjct: 212 TRRRGGGHGAFFEHDYAHGF 231
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 511 HPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYD 618
HPDKN DN +EA RRF E EA++ L D+ KR YD
Sbjct: 36 HPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREEYD 71
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGK-EGLNNGRG 654
K + + + E HPDK D + A+ RF EI+EAYEVLSD ++ YD++G + +
Sbjct: 39 KSAYKSLAREWHPDKRKDEA--ASGRFMEIAEAYEVLSDPLRKERYDRFGTFDDVKQFED 96
Query: 655 RRSAADEDYEF-GYASFPF 708
A Y F G+ F F
Sbjct: 97 NAERARSFYGFGGFGGFGF 115
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
D Y+VLG++R A+ EIK AY+
Sbjct: 22 DPYKVLGISRRASAKEIKSAYK 43
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 478 KESVQKTSTERHPDKN---PDNSDEANRRFKEISEAYEVLSDERKRRVYDQYG 627
K+ + S HPDK+ ++ +F+ +++AY++LSDE KR++YD+ G
Sbjct: 31 KKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEEKRKIYDETG 83
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +1
Query: 511 HPDKNPDNSD--EANRRFKEISEAYEVLSDERKRRVYDQYGKEGLN 642
HPD+ DN + +A R F ++ A+EVL D ++R +YD G +GL+
Sbjct: 54 HPDRFVDNDEKKDAERVFVKLRRAHEVLLDPKQRAIYDALGVQGLD 99
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 425 VDYYRVLGVTRTATDTEIKKAYR 493
+D+Y +L V + ATD EI KAYR
Sbjct: 25 IDFYAILNVPKDATDDEIIKAYR 47
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +1
Query: 481 ESVQKTSTERHPDKNPDNSDE--ANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRG 654
++ +K + + HPD D ++ A ++F +I+ A EVLS+E KRR +D G++ L++ G
Sbjct: 398 KAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLSNEEKRRAFDN-GQDPLDSEAG 456
Query: 655 R 657
R
Sbjct: 457 R 457
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
DYY++LGV R A EI KAYR
Sbjct: 380 DYYKILGVRRNANKREITKAYR 401
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +1
Query: 481 ESVQKTSTERHPDKNPDNSDE--ANRRFKEISEAYEVLSDERKRRVYDQ----YGKEGLN 642
++ +K + + HPD D ++ A ++F +I+ A EVL DE KRR +DQ E
Sbjct: 397 KAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVLQDEEKRRQFDQGVDPLDPEAQR 456
Query: 643 NGRGRRSAADEDYEFGYASF 702
G G + G+ F
Sbjct: 457 QGGGHHGGFGHGFPHGFHHF 476
Score = 34.3 bits (75), Expect = 0.093
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2
Query: 428 DYYRVLGVTRTATDTEIKKAYR 493
DYY++LGV R A+ EI KAYR
Sbjct: 379 DYYKILGVKRNASKREITKAYR 400
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 511 HPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQY 624
HPDK +++ + +F E+ AY +L+ + +R+ YD +
Sbjct: 43 HPDKVKEHNTNSTEKFMELQNAYSILTSDSRRKTYDSW 80
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 505 ERHPD--KNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQY 624
+ HPD KN + A RF+ I+ AYE L D+ + YD Y
Sbjct: 63 KHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYY 104
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSD 594
K+ +K S HPDKNPD+ + A++ F + +A + + D
Sbjct: 58 KKKYKKLSLLVHPDKNPDDRERADKAFDIVKKAIKQMED 96
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 34.3 bits (75), Expect = 0.093
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRGR 657
K + S + HPD + + S A+ F E+ AY+VL RR+YD L G GR
Sbjct: 45 KSAFYAQSKKVHPDNSSEESATAS--FLELKNAYDVLRRPADRRLYDYQ----LRGGGGR 98
Query: 658 RSAADEDYEF 687
+ Y++
Sbjct: 99 YPNGGQRYQY 108
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDE 597
K + + HPDKNP E F+ I+ AYE+LS E
Sbjct: 1347 KLAAKYHPDKNP----EGREMFERINAAYELLSSE 1377
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDE 597
K + + HPDKNP E F+ I+ AYE+LS E
Sbjct: 1347 KLAAKYHPDKNP----EGREMFERINAAYELLSSE 1377
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDE 597
K + + HPDKNP E F+ I+ AYE+LS E
Sbjct: 1347 KLAAKYHPDKNP----EGREMFERINAAYELLSSE 1377
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 31.1 bits (67), Expect = 0.86
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 12/65 (18%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANR-----------RFKEISEAYEVLSDERKRRVYD-Q 621
+++ K + + HPD++ +S +R +F + EAY+VL +E KR+ YD
Sbjct: 35 RDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKEAYDVLRNEEKRKEYDLA 94
Query: 622 YGKEG 636
+ +EG
Sbjct: 95 FSREG 99
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKE 633
K E H K P+ + + K+ SE ++ + D+ KRR Y+ K+
Sbjct: 56 KMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKD 102
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKE 633
K E H K P+ + + K+ SE ++ + D+ KRR Y+ K+
Sbjct: 57 KMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKD 103
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKE 633
K E H K P+ + + K+ SE ++ + D+ KRR Y+ K+
Sbjct: 57 KMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKD 103
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 493 KTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKE 633
K E H K P+ + + K+ SE ++ + D+ KRR Y+ K+
Sbjct: 57 KMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKD 103
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 608 ECMTSTARKD*ITEGVVALPQTRTTNLAMXASHFTFRDPEEV 733
E T+T TE + +PQT T N H F +PE+V
Sbjct: 227 EAPTTTTTIKTTTESIEPIPQTVTPNSPKIVDHEAFVEPEDV 268
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/72 (23%), Positives = 38/72 (52%)
Frame = +1
Query: 478 KESVQKTSTERHPDKNPDNSDEANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRGR 657
+E ++ + +R D+ DE RR + E + L+D+R + + +Q+ EG + +
Sbjct: 190 EEESRRLAAQRETDEARVR-DEERRRQETEKEVEKELNDKRTQSMNEQFEYEGGDEEYPQ 248
Query: 658 RSAADEDYEFGY 693
+ +++Y+ GY
Sbjct: 249 VAEKEDEYDEGY 260
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 265 CHCVISCYQPNGVHKSENRIFHCGFKVDTSCI 360
C C + CYQP R HCG T CI
Sbjct: 20 CQCQV-CYQPFNETTKLARSLHCGHTFCTECI 50
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 541 EANRRFKEISEAYEVLSDERKRRVYDQYGKEGLNNGRG 654
EA RR K+ E LSDERKR +Y++ N G
Sbjct: 343 EAGRR-KQSEEEVRKLSDERKRVIYERRRSSTSENPNG 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,009,497
Number of Sequences: 27780
Number of extensions: 265433
Number of successful extensions: 825
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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