Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0324.Seq
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   130   1e-30
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    36   0.030
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    36   0.039
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    36   0.039
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    36   0.039
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    36   0.039
Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    35   0.069
AL031632-6|CAA21008.1|  338|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical...    29   3.4  
AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and...    29   3.4  
U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   6.0  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    28   7.9  
AC024089-1|AAK09071.1|  641|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  130 bits (314), Expect = 1e-30
 Identities = 56/84 (66%), Positives = 71/84 (84%)
 Frame = +2

Query: 2   LRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTN 181
           +++TWEKL+LAARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG  TN
Sbjct: 51  VKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTN 110

Query: 182 QIQAAFREPRLLIVLDPAQDHQPI 253
           QIQ  F+EPRLL++ DP  DHQ +
Sbjct: 111 QIQKTFKEPRLLVISDPRIDHQAV 134



 Score =  105 bits (253), Expect = 2e-23
 Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 5/87 (5%)
 Frame = +1

Query: 256 EASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW 435
           EASYV +PVI+  NT+SPL+ +DI +PCN K   SIGLMWW+LARE+L LRG + R   +
Sbjct: 136 EASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGF 195

Query: 436 -----DVVVDLFFYRDPEESEKDEQQA 501
                +++ DL+FYRDP E+EK+E  A
Sbjct: 196 VLEGKEIMPDLYFYRDPTETEKEETGA 222


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 153
           GC CC    +   C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 153
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 153
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 81  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 153
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +1

Query: 31  GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 153
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 34.7 bits (76), Expect = 0.069
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = +1

Query: 28  SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSCIP*T 207
           S  SCC S      C+   +   +S+C T +C+  +C   C    T       PSC    
Sbjct: 38  SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSCSSCQ 96

Query: 208 SSLDCIGPCTRPS 246
           S+  C   CT P+
Sbjct: 97  SA--CSSACTTPT 107


>AL031632-6|CAA21008.1|  338|Caenorhabditis elegans Hypothetical
           protein Y32B12B.6 protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 78  SSHHGPSVSVLY*SLPRTPVLRLLRDVSHQVLLLTRSKLHSVNLVS*LYWTLHKTI 245
           S+HH   V +L  S P    L++ + +  +   + R K H +N  S  Y TL  T+
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVSTV 155


>AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical
           protein Y56A3A.13 protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/59 (27%), Positives = 22/59 (37%)
 Frame = +1

Query: 547 SMKTGMKHWSQWLHGLKIPPRLAAPAAASCFWSTPLLQEEWSAQVQDEWSTTSGRTSRR 723
           ++ TG+ HW   L    I  +    AAA      P  Q    + V D W     + S R
Sbjct: 196 TLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSER 254


>AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and
           fragile histidinetriad fusion protein NitFhit protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/59 (27%), Positives = 22/59 (37%)
 Frame = +1

Query: 547 SMKTGMKHWSQWLHGLKIPPRLAAPAAASCFWSTPLLQEEWSAQVQDEWSTTSGRTSRR 723
           ++ TG+ HW   L    I  +    AAA      P  Q    + V D W     + S R
Sbjct: 196 TLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSER 254


>U39742-3|AAY86225.1|  188|Caenorhabditis elegans Hypothetical
           protein C25F6.8 protein.
          Length = 188

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 253 YEASYVNIPVIAL-CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 399
           Y+  + N  + A  CNTD+  R +     CNT   + +G+ + L+AR ++
Sbjct: 35  YKLMHQNTRLFAKRCNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 264 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 371
           +C+HS    +      K CGHC PM   +HQ  P +  D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 343 TKSSHSIGLMWWLLA 387
           T+  H IG+MWWL A
Sbjct: 72  TRVEHKIGIMWWLCA 86


>AC024089-1|AAK09071.1|  641|Caenorhabditis elegans Hypothetical
           protein C36E6.1b protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 602 RPAWLHPLQLPAFGAPP 652
           +PA LHP+QLP   APP
Sbjct: 455 QPAQLHPVQLPQVMAPP 471


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,801,268
Number of Sequences: 27780
Number of extensions: 424691
Number of successful extensions: 1291
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)