Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0322.Seq
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 171 5e-43
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 162 3e-40
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 162 3e-40
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 152 2e-37
08_02_0774 - 21047696-21048889 148 5e-36
07_03_1371 - 26100553-26101767 146 2e-35
01_06_1220 + 35493575-35494765 145 3e-35
01_01_0267 + 2201404-2202501 33 0.24
02_01_0400 - 2922837-2923060,2923280-2923367,2923422-2923473,292... 32 0.54
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 31 0.72
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 31 1.3
11_06_0298 - 22072391-22073863 29 2.9
12_02_0528 + 20059613-20061472 29 3.8
05_01_0544 - 4740460-4740493,4742042-4743033 29 5.1
06_02_0346 - 14837982-14838122,14838208-14838327,14838411-148385... 28 6.7
10_02_0152 - 5902554-5903058,5904171-5904670 28 8.8
06_01_1010 + 7866158-7866661 28 8.8
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 171 bits (416), Expect = 5e-43
Identities = 84/165 (50%), Positives = 117/165 (70%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG YDP R+LGVTTLDV+ TFV E+ G+DP V VPV+GGH+G+TI+P+L
Sbjct: 168 IAAEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGIDPKDVNVPVVGGHAGVTILPLL 227
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ P + P +I LT+RIQ ++ + GSATLSMA+A A+ + LR ++G
Sbjct: 228 SQVHPPCSFT-PDEISYLTKRIQNGGTEVVEAKAGAGSATLSMAFAAAKFGDACLRAMRG 286
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQ 497
++ VVEC+YV S++TE +FA+ V LG++G E+VL G LN+FE+
Sbjct: 287 DAGVVECSYVASAVTELPFFATKVRLGRAGAEEVLPLGPLNDFER 331
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 162 bits (393), Expect = 3e-40
Identities = 86/169 (50%), Positives = 113/169 (66%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG YD ++ GVTTLDV TF V T V VPV+GGH+GITI+P+
Sbjct: 152 IAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGITILPLF 211
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ PA IKALT+R Q+ ++ + GSATLSMAYAGA + L+GL G
Sbjct: 212 SQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNG 271
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLK 509
+VVEC++V+S++TE +FAS V LGK+GVE+VLG G L+EFE++ L+
Sbjct: 272 VPDVVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGQLSEFEKEGLE 320
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 162 bits (393), Expect = 3e-40
Identities = 85/169 (50%), Positives = 113/169 (66%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG YD ++ GVTTLDV TF V T V VPV+GGH+GITI+P+
Sbjct: 153 IAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGITILPLF 212
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ PA IKALT+R Q+ ++ + GSATLSMAYAGA + L+GL G
Sbjct: 213 SQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFANACLKGLNG 272
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLK 509
+VVEC++V+S++TE +FAS V LGK+GVE+VLG G L++FE++ L+
Sbjct: 273 VPDVVECSFVQSTVTELPFFASKVKLGKNGVEEVLGLGQLSDFEKEGLE 321
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 152 bits (369), Expect = 2e-37
Identities = 81/170 (47%), Positives = 111/170 (65%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG YDP R+LGVTTLDV TFV E+ G+DP V VPVIGGH+G+TI+P+L
Sbjct: 183 IAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLL 242
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ P + +I LT RIQ GG+ + AYA ++ + LRGL+G
Sbjct: 243 SQVNPPCSFTS-EEISYLTTRIQN-----------GGTEVVE-AYAASKFADACLRGLRG 289
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLKR 512
++ +VEC++V S +TE +FAS V LG+ G+E++L G LNEFE+ L++
Sbjct: 290 DAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEK 339
>08_02_0774 - 21047696-21048889
Length = 397
Score = 148 bits (358), Expect = 5e-36
Identities = 79/171 (46%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EVLK GVY+P ++ GVTTLDV TFV + + V VPV+GGH+GITI+P+L
Sbjct: 201 IAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLL 260
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
S+ P++ +D + + LT+RIQ ++ + GSATLSMAYA AR S LR L G
Sbjct: 261 SKTMPSVTFTDE-ETEQLTKRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAG 319
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGT--LNEFEQQLLK 509
+ +V EC +V+S LTE +FAS V LGK+GVE ++ + E+E + L+
Sbjct: 320 DPDVYECTFVQSELTELPFFASRVKLGKNGVESIISADLEGVTEYEAKALE 370
>07_03_1371 - 26100553-26101767
Length = 404
Score = 146 bits (353), Expect = 2e-35
Identities = 82/176 (46%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EVLK GVYDP ++ GVTTLDV TFV E+ G+ V VPV+GGH+ TI+P+L
Sbjct: 203 IAAEVLKRKGVYDPRKLFGVTTLDVVRANTFVAEMKGLPLADVDVPVVGGHAAATILPLL 262
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL--*RRRPXGGSATLSMAYAGARLTASVLRGL 356
S+ +P +D +++ALT RIQ ++ + + GGSATLSMAYA AR + LRGL
Sbjct: 263 SKARPKTAFTD-EEVEALTRRIQNAGTEVVEAKAKAGGGSATLSMAYAAARFLEASLRGL 321
Query: 357 KGESNVVECAYVK-SSLTEATYFASPVVLGKSGVEKVLGYGT----LNEFEQQLLK 509
G+++V EC+YV+ ++ E +FA V LG+ GVE+V G L EFE + L+
Sbjct: 322 DGDADVYECSYVQCQAVPELPFFACRVKLGRDGVEEVAAAGAELRGLTEFEARALE 377
>01_06_1220 + 35493575-35494765
Length = 396
Score = 145 bits (352), Expect = 3e-35
Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EVLK GVY+P ++ GVTTLDV TF+ + + V VPV+GGH+GITI+P+L
Sbjct: 201 IAAEVLKQKGVYNPKKLFGVTTLDVVRANTFIAQKKNLKLIDVDVPVVGGHAGITILPLL 260
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
S+ +P++ ++ + + LT RIQ ++ + GSATLSMAYA AR S LR L G
Sbjct: 261 SKTRPSVTFTNE-ETEELTRRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALAG 319
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGT--LNEFEQQLLK 509
+ +V EC +V+S LTE +FAS V LGK+GVE ++ + E+E + L+
Sbjct: 320 DPDVYECTFVQSELTELLFFASRVKLGKNGVESIISSDLEGVTEYEAKALE 370
>01_01_0267 + 2201404-2202501
Length = 365
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 332 EPRAGVRHGEGRGAAXRPSPSQLRYQLLDPFGERLDLGRVTQL 204
E R G+R G G GA +P+PS R L + D+G++ +L
Sbjct: 155 ELRQGLRRGRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRL 197
>02_01_0400 -
2922837-2923060,2923280-2923367,2923422-2923473,
2924133-2924206,2924298-2924395,2924650-2924719
Length = 201
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -1
Query: 610 VGQFIMFHFVLFIRLLLGEVLAGLDVLGEFREGRFR-SCCSNSLRVP*PRTFSTPLLPST 434
+ QFI ++ ++ + +L L+V + R +CC+N + ++FS P P +
Sbjct: 64 IDQFIGYNILILRNTFISMMLLNLEVQTRSSNQQKRITCCANQTQTARRKSFSGPTSPPS 123
Query: 433 TGLAKYVASVRLD 395
+ + V S +LD
Sbjct: 124 GSVKEKVRSPKLD 136
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 295 PRPSPWRTPARGSRPPCSGD*RASPTWW 378
PR SPWR P+ G P +GD T W
Sbjct: 12 PRRSPWRHPSNGGNPNPNGDAVIDTTSW 39
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -3
Query: 353 SPEHGGREPRAGVRHGEGRGAAXRPSPSQLRYQLLDPFG 237
SP GGR AG R+G G G RPS + R P G
Sbjct: 534 SPNRGGRSRDAGSRYGSGFGDFRRPSNAFGRSSSKQPDG 572
>11_06_0298 - 22072391-22073863
Length = 490
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -3
Query: 368 GLALQSPEHGGREPRAGVRH----GEGRGAAXRPSPSQLRYQLLD 246
G A++ PE G+E A V GEGRGAA R ++L+ D
Sbjct: 422 GAAIRVPESKGKEKIAAVVREMMVGEGRGAAVRAKVAELQKMATD 466
>12_02_0528 + 20059613-20061472
Length = 619
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 292 APRPSPWRTPARGSRP 339
A P+PW TPARG+ P
Sbjct: 38 ADEPAPWYTPARGAEP 53
>05_01_0544 - 4740460-4740493,4742042-4743033
Length = 341
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 309 MAYAGARLTASVLRGLKGESNVVECA 386
++ GAR A VLR L+GE V CA
Sbjct: 94 LSTVGARTVAGVLRRLRGEGRPVTCA 119
>06_02_0346 -
14837982-14838122,14838208-14838327,14838411-14838564,
14838793-14838866,14838962-14839095,14839207-14839326,
14843174-14843308,14843842-14843976,14844343-14845003,
14845103-14845264,14845348-14845510,14880834-14881021
Length = 728
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 118 STPLISPTKVAXXDTSRVVTPSTRFGSYTPAYLST 14
STP ISPT SR++TP + TP ST
Sbjct: 318 STPDISPTNSPALQPSRIITPDAALNA-TPQITST 351
>10_02_0152 - 5902554-5903058,5904171-5904670
Length = 334
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 357 KGESNVVECAYVKSSLTEATYFASPV---VLGKSGVEKVLGYGTLNEFEQQLLKRPSLN 524
+ +S V +YV S+ E TYF SP+ +LG KV L + + + P+ N
Sbjct: 182 RDKSRDVSSSYVWESVRECTYFGSPIWDHILGYWNASKVKPDNVLILKYEDMKRNPTEN 240
>06_01_1010 + 7866158-7866661
Length = 167
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 197 GPQAE*PGQDQGAHRKD---PGAGTEVVKAKAGRRLRDPLHGVRRR 325
G +AE G A RK+ PG G + GRR R P HG +RR
Sbjct: 43 GQRAEGRGGTADARRKEAGMPGGGARAPGSGKGRRWR-PEHGGKRR 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,237
Number of Sequences: 37544
Number of extensions: 298734
Number of successful extensions: 1383
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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