Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0322.Seq
(736 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4308| Best HMM Match : Ldh_1_C (HMM E-Value=2.6e-31) 126 2e-29
SB_11831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 29 3.9
SB_44139| Best HMM Match : DUF433 (HMM E-Value=0.91) 29 3.9
SB_43295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_8891| Best HMM Match : Zot (HMM E-Value=2.5) 29 5.2
SB_5054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8) 29 5.2
SB_17406| Best HMM Match : DUF433 (HMM E-Value=4.2) 29 5.2
SB_17405| Best HMM Match : DUF433 (HMM E-Value=2.1) 29 5.2
SB_2265| Best HMM Match : DUF1118 (HMM E-Value=7.3) 29 5.2
SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_43032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_5055| Best HMM Match : DUF433 (HMM E-Value=0.4) 28 6.8
SB_2044| Best HMM Match : NIF (HMM E-Value=0.0017) 28 6.8
SB_1433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32) 28 6.8
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_51474| Best HMM Match : UPF0154 (HMM E-Value=0.5) 28 6.8
SB_38494| Best HMM Match : Phage_integrase (HMM E-Value=1.4) 28 6.8
SB_25608| Best HMM Match : DUF433 (HMM E-Value=1.4) 28 6.8
SB_12229| Best HMM Match : DUF433 (HMM E-Value=1.4) 28 6.8
SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49) 28 6.8
SB_57176| Best HMM Match : Pentapeptide_2 (HMM E-Value=1.4) 28 9.0
SB_16283| Best HMM Match : Pox_A32 (HMM E-Value=0.012) 28 9.0
SB_6330| Best HMM Match : DUF678 (HMM E-Value=5.5) 28 9.0
SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01) 28 9.0
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_4308| Best HMM Match : Ldh_1_C (HMM E-Value=2.6e-31)
Length = 368
Score = 126 bits (303), Expect = 2e-29
Identities = 69/151 (45%), Positives = 100/151 (66%)
Frame = +3
Query: 48 RVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPILSQCQPALKLSDPAKI 227
++LGVTTLD+ TFV E G+D ++ +PVIGGHSG+TI+P+LSQ P + + ++
Sbjct: 109 KILGVTTLDIVRAHTFVAEAKGLDVNNIKIPVIGGHSGVTILPLLSQTTPNVTFTQD-EL 167
Query: 228 KALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKGESNVVECAYVKSSLT 407
+ LT+RIQ G+ ++ A AGA V+ L G+ +VV+CA++KS LT
Sbjct: 168 EKLTDRIQN-----------AGTEVVN-AKAGA-----VIEALNGKKDVVQCAFIKSDLT 210
Query: 408 EATYFASPVVLGKSGVEKVLGYGTLNEFEQQ 500
EA YFA+PVVLG +GVEK LG G L+++EQ+
Sbjct: 211 EAGYFATPVVLGTNGVEKNLGMGKLSDYEQK 241
>SB_11831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.1 bits (67), Expect = 0.97
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 377 HHVGLALQSPEHGGREPRAGVRHGEGRGAAXRPSPSQLR 261
H VGL L HGG+ P + G R A RP+P ++R
Sbjct: 43 HQVGLVLSGHTHGGQLPPLHMGRGL-RSEATRPNPVRIR 80
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +3
Query: 147 GGHSGITIIPILSQCQPA----LKLSDPAKIKALTERIQELVPKL 269
GG GI ++P+L +C P L+ +P K++ ER++++ K+
Sbjct: 1057 GGVPGIILMPVLMKCTPQQLIHLEECNPQKMEEREERLEKINAKI 1101
>SB_44139| Best HMM Match : DUF433 (HMM E-Value=0.91)
Length = 119
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 280 LRLHNFGTSSWILSVSALILAGSLSLRAG 194
+ LHN+ S +I++ L GSLSLR G
Sbjct: 80 INLHNYLVSDYIIANELRTLCGSLSLRCG 108
>SB_43295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 12 LHNYLVSNYIITNELRTLCGSLSLRCG 38
>SB_8891| Best HMM Match : Zot (HMM E-Value=2.5)
Length = 392
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 105 LHNYLVSNYIITNELRTLCGSLSLRCG 131
>SB_5054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 66 LHNYLVSNYIITNELRTLCGSLSLRCG 92
>SB_36373| Best HMM Match : UPF0154 (HMM E-Value=0.8)
Length = 212
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 134 LHNYLVSNYIITNELRTLCGSLSLRCG 160
>SB_17406| Best HMM Match : DUF433 (HMM E-Value=4.2)
Length = 220
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 179 LHNYLVSNYIITNELRTLCGSLSLRCG 205
>SB_17405| Best HMM Match : DUF433 (HMM E-Value=2.1)
Length = 284
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 206 LHNYLVSNYIITNELRTLCGSLSLRCG 232
>SB_2265| Best HMM Match : DUF1118 (HMM E-Value=7.3)
Length = 501
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 188 LHNYLVSNYIITNELRTLCGSLSLRCG 214
>SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 224 DQGAHRKDPGAGTEVVKAKAGRRLRDPLHGVRRR 325
DQG A TE V ++ R++R P+ V++R
Sbjct: 596 DQGTPADPDDAHTETVPRRSARKVRSPIRAVQQR 629
>SB_43032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S++I++ L GSLSLR G
Sbjct: 12 LHNYLVSNYIVTNELRTLCGSLSLRCG 38
>SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 728 LHNYLVSDYIINNELRTLCGSLSLRCG 754
>SB_5055| Best HMM Match : DUF433 (HMM E-Value=0.4)
Length = 280
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 202 LHNYLVSDYIITNELRTLCGSLSLRCG 228
>SB_2044| Best HMM Match : NIF (HMM E-Value=0.0017)
Length = 264
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 85 LHNYLVSDYIIANELRTLCGSLSLRCG 111
>SB_1433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 710 LHNYQVSDYIINNELRKLCGSLSLRCG 736
>SB_304| Best HMM Match : UPF0154 (HMM E-Value=0.32)
Length = 701
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 104 LHNYLVSDYIITNELRTLCGSLSLRCG 130
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN S +I++ L L GSLSLR G
Sbjct: 262 LHNDLVSDYIINNELLTLCGSLSLRCG 288
>SB_51474| Best HMM Match : UPF0154 (HMM E-Value=0.5)
Length = 246
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 192 LHNYLVSDYIITNELRTLCGSLSLRCG 218
>SB_38494| Best HMM Match : Phage_integrase (HMM E-Value=1.4)
Length = 192
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 104 LHNYLVSDYIITNKLRTLCGSLSLRCG 130
>SB_25608| Best HMM Match : DUF433 (HMM E-Value=1.4)
Length = 396
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 148 LHNYLVSDYIITNELRTLCGSLSLRCG 174
>SB_12229| Best HMM Match : DUF433 (HMM E-Value=1.4)
Length = 351
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 148 LHNYLVSDYIITNELRTLCGSLSLRCG 174
>SB_6406| Best HMM Match : Mis12 (HMM E-Value=0.49)
Length = 714
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 266 LHNYLVSDYIITNELRTLCGSLSLRCG 292
>SB_57176| Best HMM Match : Pentapeptide_2 (HMM E-Value=1.4)
Length = 270
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 291 GSATLSMAYAGARLTASVLRGLKGESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVL 467
G S G SV+ G G+ +VVE KSS+ E S VV G+ G V+
Sbjct: 6 GEGEKSSVVEGEGEKGSVVEGEGGKGSVVEGKGEKSSVVEGKEGKSSVVEGEGGKGSVV 64
>SB_16283| Best HMM Match : Pox_A32 (HMM E-Value=0.012)
Length = 410
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN S +I++ IL GSLSLR G
Sbjct: 287 LHNDLVSDYIINNELRILCGSLSLRCG 313
>SB_6330| Best HMM Match : DUF678 (HMM E-Value=5.5)
Length = 200
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN+ S +I++ L GSLSLR G
Sbjct: 154 LHNYLVSDYIVTNELRTLCGSLSLRCG 180
>SB_21216| Best HMM Match : Pox_A32 (HMM E-Value=0.01)
Length = 1062
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 274 LHNFGTSSWILSVSALILAGSLSLRAG 194
LHN S +I++ IL GSLSLR G
Sbjct: 658 LHNDLVSDYIINNELRILCGSLSLRCG 684
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 189 CQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGS 296
C+P+++ +DP K +AL + LV L +RP G +
Sbjct: 288 CEPSVEAADPDKARALWTLSERLVTSL--KRPQGSN 321
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,438,495
Number of Sequences: 59808
Number of extensions: 299207
Number of successful extensions: 1433
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -