Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0322.Seq
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09660.1 68418.m01117 malate dehydrogenase, glyoxysomal ident... 174 6e-44
At2g22780.1 68415.m02702 malate dehydrogenase, glyoxysomal, puta... 169 2e-42
At3g15020.1 68416.m01900 malate dehydrogenase [NAD], mitochondri... 161 6e-40
At1g53240.1 68414.m06033 malate dehydrogenase [NAD], mitochondri... 154 7e-38
At3g47520.1 68416.m05168 malate dehydrogenase [NAD], chloroplast... 152 3e-37
At3g53910.1 68416.m05956 malate dehydrogenase-related similar to... 44 8e-05
At3g48850.1 68416.m05335 mitochondrial phosphate transporter, pu... 31 0.79
>At5g09660.1 68418.m01117 malate dehydrogenase, glyoxysomal
identical to SP|Q9ZP05; identical to cDNA microbody
NAD-dependent malate dehydrogenase GI:3929650
Length = 354
Score = 174 bits (423), Expect = 6e-44
Identities = 85/165 (51%), Positives = 118/165 (71%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG YDP ++LGVTTLDV+ TFV E+ G+DP V VPV+GGH+G+TI+P+L
Sbjct: 168 IAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLL 227
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ +P + P +I+ LT RIQ ++ + GSATLSMAYA A+ + LRGL+G
Sbjct: 228 SQVKPPSSFT-PQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRG 286
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQ 497
++NVVEC++V S +TE +FA+ V LG++G E+V G LNE+E+
Sbjct: 287 DANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLGPLNEYER 331
>At2g22780.1 68415.m02702 malate dehydrogenase, glyoxysomal,
putative strong similarity to glyoxysomal malate
dehydrogenase (EC 1.1.1.37) SP|P19446 {Citrullus
lanatus}, SP|P46488 {Cucumis sativus}, [Medicago sativa]
GI:2827078, SP|Q42972 {Oryza sativa}, SP|Q9ZP05
{Arabidopsis thaliana}, SP|P37228 {Glycine max};
contains InterPro entry IPR001236: Lactate/malate
dehydrogenase
Length = 354
Score = 169 bits (410), Expect = 2e-42
Identities = 82/170 (48%), Positives = 117/170 (68%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EV K AG +DP +++GVT LDV TFV E+ +DP V VPV+GGH+G+TI+P+L
Sbjct: 168 IAAEVFKKAGTFDPKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLL 227
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ +P + +I+ LT+RIQ ++ + GSATLSMAYA + LRGL+G
Sbjct: 228 SQVKPPCSFTQK-EIEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRG 286
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLKR 512
++N+VECAYV S +TE +FAS V LG+ G+++V G G LNE+E+ L++
Sbjct: 287 DANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEK 336
>At3g15020.1 68416.m01900 malate dehydrogenase [NAD], mitochondrial,
putative similar to mitochondrial NAD-dependent malate
dehydrogenase GB:CAA10320 SP|Q9ZP06 [Arabidopsis
thaliana]; contains InterPro entry IPR001236:
Lactate/malate dehydrogenase
Length = 341
Score = 161 bits (390), Expect = 6e-40
Identities = 84/169 (49%), Positives = 115/169 (68%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+E+ K AG YD ++ GVTTLDV TF + V+ V VPV+GGH+GITI+P+
Sbjct: 155 IAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLF 214
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ P LSD I+ALT+R Q+ ++ + GSATLSMAYAGA + L+GL G
Sbjct: 215 SQASPQANLSDDL-IRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNG 273
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLK 509
NVVEC++V+S++TE +FAS V LGK+GVE+VL G L++FE++ L+
Sbjct: 274 VPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322
>At1g53240.1 68414.m06033 malate dehydrogenase [NAD], mitochondrial
identical to mitochondrial NAD-dependent malate
dehydrogenase GI:3929649 SP|Q9ZP06 from [Arabidopsis
thaliana]; contains InterPro entry IPR001236:
Lactate/malate dehydrogenase
Length = 341
Score = 154 bits (373), Expect = 7e-38
Identities = 81/169 (47%), Positives = 112/169 (66%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+E+ K AG+YD ++ GVTTLDV TF V V VPVIGGH+G+TI+P+
Sbjct: 155 IAAEIFKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTILPLF 214
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
SQ P LS + ALT+R Q+ ++ + GSATLSMAYAGA + L+GL G
Sbjct: 215 SQATPQANLSSDI-LTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNG 273
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGTLNEFEQQLLK 509
+V+EC+YV+S++TE +FAS V LGK+GVE+VL G L++FE++ L+
Sbjct: 274 VPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322
>At3g47520.1 68416.m05168 malate dehydrogenase [NAD], chloroplast
(MDH) identical to chloroplast NAD-malate dehydrogenase
[Arabidopsis thaliana] GI:3256066; contains InterPro
entry IPR001236: Lactate/malate dehydrogenase; contains
Pfam profiles PF00056: lactate/malate dehydrogenase, NAD
binding domain and PF02866: lactate/malate
dehydrogenase, alpha/beta C-terminal domain
Length = 403
Score = 152 bits (368), Expect = 3e-37
Identities = 82/171 (47%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 IASEVLK*AGVYDPNRVLGVTTLDVSXXATFVGEINGVDPTSVAVPVIGGHSGITIIPIL 182
IA+EVLK GVYDP ++ GVTTLDV TFV + + V VPVIGGH+GITI+P+L
Sbjct: 208 IAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAGITILPLL 267
Query: 183 SQCQPALKLSDPAKIKALTERIQELVPKL*RRRPXGGSATLSMAYAGARLTASVLRGLKG 362
S+ +P++ +D +I+ LT RIQ ++ + GSATLSMAYA AR S LR L G
Sbjct: 268 SKTKPSVNFTD-EEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESSLRALDG 326
Query: 363 ESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVL--GYGTLNEFEQQLLK 509
+ +V EC++V+S+LT+ +FAS V +GK+G+E V+ L E+EQ+ L+
Sbjct: 327 DGDVYECSFVESTLTDLPFFASRVKIGKNGLEAVIESDLQGLTEYEQKALE 377
>At3g53910.1 68416.m05956 malate dehydrogenase-related similar to
malate dehydrogenase precursor [Medicago sativa]
GI:2827084
Length = 108
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 YAGARLTASVLRGLKGESNVVECAYVKSSLTEATYFASPVVLGKSGVEKVLGYGT--LNE 488
YA S++R L G+ +V + A+V SS+TE YFA+ +GK +E+V+ L +
Sbjct: 9 YAMISFLKSLIRALDGDDDVFDFAFVASSVTELPYFATRTKIGKKRIEEVIDSDLQGLAK 68
Query: 489 FEQQLLK 509
+E++ +K
Sbjct: 69 YEERAIK 75
>At3g48850.1 68416.m05335 mitochondrial phosphate transporter,
putative similar to mitochondrial phosphate transporter
GI:3318617 from [Arabidopsis thaliana]
Length = 363
Score = 31.1 bits (67), Expect = 0.79
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = -1
Query: 142 TGTATEVGSTPLISPT--KVAXXDTS-RVVTPSTRFGSYTPAYLS 17
T +T + S PLISPT V+ TS + TP+ + Y+PAY +
Sbjct: 24 TTMSTHLKSQPLISPTNSSVSSNGTSFAIATPNEKVEMYSPAYFA 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,156,163
Number of Sequences: 28952
Number of extensions: 209181
Number of successful extensions: 749
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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