Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0321.Seq
(746 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 34 0.019
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.043
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 30 0.40
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 29 0.70
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 28 1.2
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 28 1.2
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 28 1.2
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 2.8
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAPB2B4.07 |||ubiquitin family protein, human UBTD1 homolog|Sch... 27 3.8
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 3.8
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.8
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.0
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 26 5.0
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 26 5.0
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.0
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 6.6
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 6.6
SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 26 6.6
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 26 6.6
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 26 6.6
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 25 8.7
SPBC21B10.12 |rec6||meiotic recombination protein Rec6|Schizosac... 25 8.7
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 25 8.7
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 8.7
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 34.3 bits (75), Expect = 0.019
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +1
Query: 274 IDETASGAMNEESAYIGDNCLSTPADTEENSP--QNDQDNQLDSMIKEPESEEAEGLGDA 447
+D+T+ +NEESAY+ + EE +P + + +L+++++E E ++ + +
Sbjct: 1051 LDQTSQ--LNEESAYLEKRIQTLERSLEEVTPIWKKQWERELNAIVQEQEFLDSHTVLIS 1108
Query: 448 EESPDQSISSAILPTDSGVGELKEHQAFK 534
+ D S S +L S + EL+ + K
Sbjct: 1109 DLKRDLSALSTVLSNVSAIAELQAKSSIK 1137
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.043
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +1
Query: 253 SAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE 432
S+ ++ D ++S + +E S+ D+ S+ +D+E S D D+ +S E +S
Sbjct: 229 SSSEDNDSSSSSSDSESESSSEDSDSS-SSSSDSESESSSKDSDSSSNSSDSEDDSSSDS 287
Query: 433 GLGDAEESPDQSISSA 480
++E S + S S++
Sbjct: 288 SDSESESSSEDSDSTS 303
Score = 32.3 bits (70), Expect = 0.076
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 277 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES 456
DE+ S + ES+ ++ S+ +D+E S D D+ S E ES + S
Sbjct: 110 DESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSS 169
Query: 457 PDQSISSA 480
+S SS+
Sbjct: 170 SSESESSS 177
Score = 31.9 bits (69), Expect = 0.100
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 253 SAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPE--SEE 426
S+ + D ++S + +E S+ D+ S+ +D+E S D D+ S E E S++
Sbjct: 211 SSSEGSDSSSSSSSSESESSSEDNDSS-SSSSDSESESSSEDSDSSSSSSDSESESSSKD 269
Query: 427 AEGLGDAEESPDQSISSA 480
++ ++ +S D S S +
Sbjct: 270 SDSSSNSSDSEDDSSSDS 287
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 SAEDEMDIDETASGAMNEESAYIGDNCLSTPA-DTEENSPQNDQDNQLDSMIKEPESEEA 429
S+ ++ D ++S + +E S+ D+ S+ + ++E +S ND + E SE++
Sbjct: 139 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 198
Query: 430 EGLGDAEESPDQSIS 474
+ + +S +S S
Sbjct: 199 DSSSSSSDSESESSS 213
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 SAEDEMDIDETASGAMNEESAYIGDNCLSTPA-DTEENSPQNDQDNQLDSMIKEPESEEA 429
S+ ++ D ++S + +E S+ D+ S+ + ++E +S ND + E SE++
Sbjct: 193 SSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDS 252
Query: 430 EGLGDAEESPDQSIS 474
+ + +S +S S
Sbjct: 253 DSSSSSSDSESESSS 267
Score = 31.1 bits (67), Expect = 0.17
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +1
Query: 253 SAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE 432
S+ + D ++S + +E S+ D+ S+ +D+E S D D+ S E ES
Sbjct: 157 SSSEGSDSSSSSSSSESESSSEDNDSS-SSSSDSESESSSEDSDSSSSSSDSESESSSEG 215
Query: 433 GLGDAEESPDQSISSA 480
+ S +S SS+
Sbjct: 216 SDSSSSSSSSESESSS 231
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/75 (21%), Positives = 33/75 (44%)
Frame = +1
Query: 256 AEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEG 435
+E + +++S + + ES + S+ + + S + +DN S + ESE +
Sbjct: 137 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 196
Query: 436 LGDAEESPDQSISSA 480
D+ S S S +
Sbjct: 197 DSDSSSSSSDSESES 211
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/75 (21%), Positives = 33/75 (44%)
Frame = +1
Query: 256 AEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEG 435
+E + +++S + + ES + S+ + + S + +DN S + ESE +
Sbjct: 191 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 250
Query: 436 LGDAEESPDQSISSA 480
D+ S S S +
Sbjct: 251 DSDSSSSSSDSESES 265
Score = 28.7 bits (61), Expect = 0.93
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 525 SVQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
S + ESS+ D D + S DD + SS ++ S+ S ST+ SSS
Sbjct: 259 SDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSS 312
Score = 26.6 bits (56), Expect = 3.8
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 513 EGAPSVQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
E S + ESS+ D D + S + + S + S S S++E GSD SSS
Sbjct: 111 ESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSE-GSDSSSS 167
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 525 SVQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
S + ESS+ D D + S + + S + S S S++E GSD SSS
Sbjct: 169 SSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSE-GSDSSSS 221
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 259 EDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 438
E+E + +E + + ES ++ +++EE S ++++ S +K+PE EEA+
Sbjct: 91 EEETESEEDSEVSDESESESESESESEEESESEEESDESERSGP-SSFLKKPEKEEAKPA 149
Query: 439 G 441
G
Sbjct: 150 G 150
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 355 EENSPQNDQDNQLDSMIKEP-ESEEAEGLGDAEESPDQSISSAILPTDSGVGELKE 519
+E+ Q + N + KE E +++E D +E+ + ISS ++P D + L E
Sbjct: 317 KEHPIQLEDSNNSAELAKETKEEDDSENSVDKKENEEDIISSTMMPQDEVLANLTE 372
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 265 EMDIDETASGAMNEESAYIGDNCLSTPADTEENS 366
EMD+ +G + EES DN + P DT++N+
Sbjct: 35 EMDVQSLLTGEL-EESYTKADNSIVVPTDTQKNT 67
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 259 EDEMDIDETASGAMNEESAYIGDNCLSTPADTE-ENSPQNDQDNQLDSM-IKEPESEEA- 429
E E + DE G EE GD D E EN + ++ + + + I+E E E A
Sbjct: 185 EMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDIEEEEEESAL 244
Query: 430 EGLGDAEESPDQ 465
AEE P++
Sbjct: 245 ANASAAEEKPEE 256
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +3
Query: 525 SVQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAV 704
S +D+ +DE +GG+ +SS Q+++++ + + E + +SSS P+ V
Sbjct: 221 SDRDEVLRLLDEQKGDGGIHEYHTSAGMSSLIQDMINSQRTKNKVEE-AIVSSSAPSSGV 279
Query: 705 INIIPQP 725
+++ P
Sbjct: 280 SSVLNTP 286
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 95 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEE 241
SD + + S D ++ + Q D+ + D DD +NN DD ++ E
Sbjct: 194 SDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSE 242
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 519 APSVQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNR 698
+PS ++T + +SS + SS++ S+ SSS++ S SSS +
Sbjct: 143 SPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 202
Query: 699 AVINIIP 719
+ + +P
Sbjct: 203 SSSSSVP 209
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 27.1 bits (57), Expect = 2.8
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 561 DIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
+I EG +SS + SS++ + ST SSS+A P + SSS
Sbjct: 109 NIVEGAASSSSSSS--SSSSSLVSSTTSSSSSATPSTTSSSS 148
>SPAPB2B4.07 |||ubiquitin family protein, human UBTD1
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 176 DTIDDLPDNNSASDDVTTEPEE 241
D++DD DN +S+D T PEE
Sbjct: 129 DSLDDEDDNMISSNDPTKSPEE 150
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +2
Query: 95 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELGNAVLKMKW 271
S + H+ E+ + N D + +I + S SD PEEL + + + K+
Sbjct: 795 SSSSFHNPDLTDTEIQETSFNNDLRPVASIQSAETSRSVSDRPANFPEELNDTLFEQKY 853
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 534 DDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGP 692
+ ST+ GG+ SS + SS+ +T SSST S SSS P
Sbjct: 118 EGSDSTLAASTISGGIYSSTSASSTSSST----ATPSSSSTTSSSSSSSSSTP 166
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 531 QDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAV 704
+DD S + DE+ G D S + QE +G+S P SD + R V
Sbjct: 926 EDDMSLSDDEEKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKTKKRRV 983
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 603 DISSAAQEILSTGISSSTAEPGSDISSSGPN 695
D+S + ST +S+ST P S +SSG N
Sbjct: 596 DVSGSVTTPTSTPLSNSTVAPTSTFTSSGFN 626
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 543 SSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
SST +A S+ SSA LS+ +S++A S SSS
Sbjct: 152 SSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSS 199
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 343 PADTEENSPQNDQDNQLDSMIKEPESEEA--EGLGDAEESPDQS---ISSAILPTD 495
P++ E+N + Q + + I EPE +E E D EESP +S IS ++ P +
Sbjct: 13 PSEKEDNVER--QTKKYNFEIDEPEEQEKKDEKEDDKEESPSKSLEEISQSVSPVE 66
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 349 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQA 528
+ E+ QND +NQ ++KE +AE++P + LP GV L E +A
Sbjct: 242 EEEDMMHQNDPNNQSPKLLKEFRKLHEP---NAEDAPSRDYIP--LPPHKGVDILSEVEA 296
Query: 529 FKMMNQVQWMKI*LKEGLPAVMMST 603
K + + + + + LP+V M T
Sbjct: 297 VK--DWSKRLHLGPRASLPSVCMYT 319
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 543 SSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSS 686
SS+ ++ AS+DD + SSA + S S+S+A S S+S
Sbjct: 235 SSSSGAIVSNAKTASTDDSSSASSATSSVSSVVSSASSALSASASSAS 282
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 543 SSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISS 683
S+T++ +I + ++ S SS+ ST SSS+ GS ISS
Sbjct: 410 STTINTNIVQATISQSSTSG--SSSGSSSASTTASSSSVSSGSSISS 454
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +2
Query: 92 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELGNAVLKM 265
E + T ++ + E+S Q ++N +A+ DD + DD+ + + L+M
Sbjct: 134 EQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFDDQDLQM 191
>SPAC12G12.13c |cid14||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 684
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 424 EAEGLGDAEESPDQSISSAILPTDSGVGELKEH 522
E EG+ ++ P SI S IL D GV + +EH
Sbjct: 527 EREGVNRVKDFP--SILSTILSVDEGVRQHREH 557
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 364 SPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ 465
S +N+ LDS E +SEE G G+ P+Q
Sbjct: 170 SERNESSLSLDSGESEKKSEEDNGNGEQNYIPEQ 203
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 95 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELGNAVLK-MKW 271
+D ++S + ++ N+ + ID+LP+ ++ D EE G A+L+ M W
Sbjct: 147 NDDVKSANSANLQPITTNVVNEKDAYRKDIDELPEPSNMKDYSEIPVEEFGAAMLRGMGW 206
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/71 (25%), Positives = 26/71 (36%)
Frame = +1
Query: 259 EDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 438
+DE + E G NEE I N N + D Q ++ E +EA
Sbjct: 12 KDESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNME-DEANQY 70
Query: 439 GDAEESPDQSI 471
+ S DQ +
Sbjct: 71 EQTDSSSDQEV 81
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 86 KMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPE 238
K+ES + A++ DNQD + ++ + NNSA D +P+
Sbjct: 55 KLESSVGEQESATKRAKIENLKDNQDLIPNNDVNGIHINNSAVADTKHKPK 105
>SPBC21B10.12 |rec6||meiotic recombination protein
Rec6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 346 ADTEENSPQNDQ----DNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDS 498
AD EEN ++ D+QL +S E + EE D+ +S A++ TD+
Sbjct: 112 ADDEENKQYSESSLLDDSQLLCSSPPVDSTEEARTCNVEEDQDEILSVALVTTDT 166
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 131 AEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEP 235
A SPQ N D+Q A T +D N +T P
Sbjct: 334 ASYSPQNSNFDHQAAATTNDAHQNVVRGSAITIAP 368
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 528 VQDDESSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPG 668
+ D + D+ + S DD N ISS E T S S+A+ G
Sbjct: 427 LNDTTKNQNDQILPNETSESDDDANSISSMENEEERTSDSKSSAKQG 473
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,697,542
Number of Sequences: 5004
Number of extensions: 50434
Number of successful extensions: 299
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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