Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0321.Seq
(746 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 1.7
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 23 2.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 4.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 4.0
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 5.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.8 bits (49), Expect = 1.7
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 543 SSTMDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGS 671
S+TM+ GG+ S I A E LST SS P S
Sbjct: 281 STTMNGSPGSGGIRSDQMGVKIEPAEAESLSTSGSSGILTPVS 323
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 23.4 bits (48), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 83 TKMESDPATHSDSHDGAEVSPQADNQ 160
+KME DPAT D+ QADNQ
Sbjct: 83 SKMEIDPATQKDA---GYYECQADNQ 105
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +3
Query: 555 DEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGP 692
+++ A GG A + + A+ T ++T P + + +GP
Sbjct: 193 EDEFANGGAARDESKAGSTDASTPATVTTTGATTTLPAASATGTGP 238
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 99 TLLLTAILTMARKCRLKPITRITRLPILSMICLTII 206
TLL A T L P++ + I + +CLT +
Sbjct: 280 TLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFV 315
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 99 TLLLTAILTMARKCRLKPITRITRLPILSMICLTII 206
TLL A T L P++ + I + +CLT +
Sbjct: 280 TLLTMATQTSGINASLPPVSYTKAIDIWTGVCLTFV 315
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/45 (24%), Positives = 17/45 (37%)
Frame = -1
Query: 359 SSVSAGVERQLSPIYADSSFIAPEAVXXXXXXXSALHYQVPQAQW 225
SSV G ++ Y + APE + +A Y + W
Sbjct: 201 SSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGIVAW 245
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 348 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 404
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 416 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 472
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 9.3
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +3
Query: 552 MDEDIAEGGVASSDDVNDISSAAQEILSTGISSSTAEPGSDISSSGPNRAVINIIPQ 722
+D+DI A++ I SA +STG ++ + + + SG + I+ +
Sbjct: 416 IDDDIRHKNSAANPPSGYIRSAFGTPISTGRPATVEDTSASLPLSGMQEELHTILKE 472
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,448
Number of Sequences: 438
Number of extensions: 3134
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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