Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0320.Seq
(755 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.5
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 24 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 3.5
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 4.6
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 22 6.1
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 6.1
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 6.1
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 8.0
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +2
Query: 596 TCALFIPAVNGQGRMPRTGWLGLPWHYL 679
TC LF ++ R G GL W YL
Sbjct: 401 TCELFQATLSSSSDTNRFGTSGLAWLYL 428
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 115 NDLISIIIMWVTPTRNIFDNRTMGY 189
ND S+++ W P R ++ +GY
Sbjct: 1007 NDQHSLVVYWKPPAREEWNGDILGY 1031
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 556 IINIFVSYCVYIF 518
+INIF SY YIF
Sbjct: 382 LINIFASYFAYIF 394
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 556 IINIFVSYCVYIF 518
+INIF SY YIF
Sbjct: 382 LINIFASYFAYIF 394
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 556 IINIFVSYCVYIF 518
+INIF SY YIF
Sbjct: 382 LINIFASYFAYIF 394
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 556 IINIFVSYCVYIF 518
+INIF SY YIF
Sbjct: 382 LINIFASYFAYIF 394
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 370 RQCSCYYIIDPGVRSLM 320
RQ YYI DP V SLM
Sbjct: 131 RQEKPYYIADPEVDSLM 147
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 237 VNQKGSLASCWYFRQRPSTPNLGPTGYYI 323
+++K + W Q P TP+L GY +
Sbjct: 469 LDKKNVVVQSWGASQWPDTPDLISDGYRV 497
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 111 WERFNKHYHHVGDTYKKY 164
WER +K Y G K+Y
Sbjct: 100 WERLSKKYDPQGQYKKRY 117
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 195 KHLCILFYNVAKDMVNQKGSLASCW 269
K L Y V ++ GSL +CW
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCW 234
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 152 LQEIYLITALWDTEET 199
+QE+ L T LW+ + T
Sbjct: 279 IQEVMLFTILWNCQNT 294
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 560 IHNQHFCKLLCLHLQSYELVTVAITECNF-AAYKFC 456
+ ++ FC + H +SY ++ A + C F AA +C
Sbjct: 18 VQSEIFCLVNFNHRESYFRLSKAKSFCTFVAALVYC 53
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,290
Number of Sequences: 336
Number of extensions: 5368
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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