Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0318.Seq
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 43 5e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 38 0.001
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.13
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 29 0.68
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 28 1.6
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 27 3.6
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 27 3.6
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 4.8
SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Ma... 26 4.8
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 26 4.8
SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 26 4.8
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 26 4.8
SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces ... 26 6.4
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 25 8.4
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 25 8.4
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 25 8.4
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 25 8.4
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 42.7 bits (96), Expect = 5e-05
Identities = 31/119 (26%), Positives = 56/119 (47%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L +Q T ++ N+E N + D+ GQ+++R + + + KG+
Sbjct: 34 KTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIR-PLWRHYFTGTKGL 92
Query: 435 VFVIDSINIQKEIRDVAEYLYTILWIRSFRETQLPF*YCATNQDQPLAKGSQVIKGLLE 611
+FV+DS + I + + L+ I+ R R+ L A QD P A I +L+
Sbjct: 93 IFVVDSAD-SNRISEARQELHRIISDREMRDCLLL--VLANKQDLPGALSPAQITDVLQ 148
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 37.9 bits (84), Expect = 0.001
Identities = 30/114 (26%), Positives = 54/114 (47%)
Frame = +3
Query: 255 KTLLFVRLAYSQYRQTFTSMKENIEEYITSNKTLKIVDLPGQERLRNKFFEQHKSSAKGI 434
KT + +L + T ++ N+E N + + D+ GQ+++R + + + +GI
Sbjct: 30 KTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIR-PLWRHYFQNTQGI 88
Query: 435 VFVIDSINIQKEIRDVAEYLYTILWIRSFRETQLPF*YCATNQDQPLAKGSQVI 596
+FV+DS N ++ I + E L +L R+ L A QD P A + I
Sbjct: 89 IFVVDS-NDRERISEAHEELQRMLNEDELRDALLL--VFANKQDLPNAMNAAEI 139
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.5 bits (68), Expect = 0.13
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 407 FKEFISQSLLSRQINYF-QCFIRSYILFNIFFHRSKSLSVLRVSESYKQQSLPESDRPIN 231
F FI+ S+ + F C + + I+ +F H SK L++ ++E Y + P RP N
Sbjct: 421 FTPFITNSIGFKYGYIFASCNLCASIVTFLFAHESKGLTLEEINELYLSDAKPWMSRPKN 480
Query: 230 NTEL 219
+E+
Sbjct: 481 LSEM 484
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 29.1 bits (62), Expect = 0.68
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 433 IPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 311
+P+A +L C + P RST++N L EV S I SF+
Sbjct: 463 LPIAFILGCLVGILQHYIAP-RSTMYNSLFEVTGSIITSFL 502
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/22 (40%), Positives = 18/22 (81%)
Frame = +1
Query: 136 RYITLLSLIVLAVTLIFWWIFS 201
+YI ++S+IVL +T + W++F+
Sbjct: 1440 QYINIISIIVLVLTSLAWFLFN 1461
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 338 YILFNIFFHRSKSLSVLRVSESYKQQSLPESDRPINN 228
Y+LF +FF S +SV+ E+Y SLP +N+
Sbjct: 252 YVLF-VFFSGSSGVSVVITDENYLPVSLPVYSPVLNS 287
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 508 HKIVYRYSATSLISFCILIESITNTIPLALL 416
H ++ + T+L SFC + ++N PL+LL
Sbjct: 615 HGPLHGFPLTNLQSFCTISSFLSNDFPLSLL 645
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 369 LPGQERLRNKFFEQHKSSAKGIVFVIDSI-NIQKEIRDVAEYLYT 500
L + L N FFE+ K+ + ++++DS+ ++ EIR + + T
Sbjct: 440 LAEDQLLLNNFFEELKNKLESDLYLLDSVFDLVPEIRSLLQQFST 484
>SPAC23C11.06c |||hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 535
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 393 NKFFEQHKSSAKGIVFVIDSINIQKEIRDVAEYLYT-ILWIRSF 521
N F +H S KGIVFV D+ ++Q ++D ++L +L++R +
Sbjct: 363 NVFAARHLSEVKGIVFV-DAGSVQ-TLKDSGQFLSRFLLFVRGW 404
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 437 HNSLSTTLVLFKEFISQSLLSRQIN--YFQCF-IRSYILFNIF 318
HNSLST L + S L + IN +F F + + LF IF
Sbjct: 202 HNSLSTNAALSASVVLASRLEKSINVFFFILFAVHWFALFPIF 244
>SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 687
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -1
Query: 469 SFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIYSSIFSFI 311
SFC+ + ++T + ALL+ + +L + P I ++L +I +FSF+
Sbjct: 523 SFCVFLVALTRVVSFALLIPIAFDLAI---IP--KVIIAIILIIIQGLVFSFM 570
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = -3
Query: 491 VFCYISD-FFLYIDRINHKHNSLSTTLVLFKEFISQSLLSRQINYFQCFIRSYILFNIF 318
+F + +D + L + + + + SLSTT+ LFK+ + + LS I+Y +I NIF
Sbjct: 363 IFFFGTDRYSLPLYKTHARRFSLSTTIHLFKKIV-RITLSTFISYTWIPFLLFIFLNIF 420
>SPCC320.07c |mde7||RNA-binding protein Mde7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 761
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 529 HNSPSNIVQQTRTSH*QKEAKLSKDYSKKK 618
HNSP N + S+ +E KL +SK+K
Sbjct: 597 HNSPCNTIYVGNLSNPDQEKKLRLAFSKEK 626
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 374 RQINYFQCFIRSYILFNIFFH-RSKSLSVLRVSESYKQQSLPESDRPINNTELRR 213
RQ YF+CF ++ + N F + K L+ +S ++ S E+ N++ + R
Sbjct: 15 RQPTYFRCFHKTTVHLNSFKNDPKKELNSNLNEKSVEESSKNETKEQFNSSSIPR 69
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 651 LQSVDPSEGNIGSFLGK 701
L+SVD S G++GS++ K
Sbjct: 4 LESVDASSGSVGSYMSK 20
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 627 VRVTKSNQLQSVDPSEGNIGSFLGKEGKDFEFSH 728
+ + S+ L+ V + GNI + GKD EF H
Sbjct: 188 IHLAVSSLLEVVQTASGNIELAIMDPGKDVEFLH 221
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +1
Query: 160 IVLAVTLIFWWIF--SRRYTLRNSVLLMGL 243
+ +TL+F+W+F SRR + ++L+ G+
Sbjct: 48 VFFLLTLVFYWVFDLSRRRATQLTILVCGV 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,944,853
Number of Sequences: 5004
Number of extensions: 62569
Number of successful extensions: 236
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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