Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0318.Seq
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.0  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.0  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 222 VAKSIPSRENPPKYEGYC 169
           V  +IP+ ENP  Y  +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 222 VAKSIPSRENPPKYEGYC 169
           V  +IP+ ENP  Y  +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 222 VAKSIPSRENPPKYEGYC 169
           V  +IP+ ENP  Y  +C
Sbjct: 269 VTAAIPTSENPADYRYFC 286


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +2

Query: 428 GNCVCD*FYQYTERNQRCSRIPI 496
           G C C   YQ     Q C+  PI
Sbjct: 245 GGCHCKPGYQADVEKQECTECPI 267


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -1

Query: 475 LISFCILIESITNTIPLALLLCCSKNLF 392
           L S C+L++++ N +     +   KN++
Sbjct: 12  LASLCLLVQAVPNKVADKTYVTRQKNIY 39


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 256 FQSLIGPLTILSCEEYTFERKSTKI 182
           +  L+  LT   CE   FE KST +
Sbjct: 404 YGELLHALTSGKCEHRPFEPKSTAV 428


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -1

Query: 475 LISFCILIESITNTIPLALLLCCSKNLF 392
           L S C+L++++ N +     +   KN++
Sbjct: 12  LASLCLLVQAVPNKVADKTYVTRQKNIY 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,452
Number of Sequences: 438
Number of extensions: 4573
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)