Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0316.Seq
(732 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 159 1e-39
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 159 2e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 159 2e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 158 3e-39
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 158 3e-39
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 158 3e-39
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 157 5e-39
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 156 2e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 155 2e-38
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 60 1e-09
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 60 1e-09
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 60 1e-09
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 60 1e-09
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 60 1e-09
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 58 6e-09
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 53 2e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 38 0.007
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 35 0.048
At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2 (R... 29 3.2
At5g60120.1 68418.m07537 AP2 domain-containing transcription fac... 27 9.7
At5g41720.1 68418.m05073 F-box family protein contains Pfam PF00... 27 9.7
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 159 bits (387), Expect = 1e-39
Identities = 73/130 (56%), Positives = 91/130 (70%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 256 VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 315
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQ++NIQNKNSSYFVEWIPNNVK++VCDIPP+GLKM+ATF+GNST+I
Sbjct: 316 AIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSI 375
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 376 QEMFRRVSEQ 385
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 427
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT LRFPG
Sbjct: 232 ATMSGVTCSLRFPG 245
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (386), Expect = 2e-39
Identities = 74/130 (56%), Positives = 90/130 (69%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
AVFRG++S KEVDEQMMNIQNKNSSYFVEWIPNNVK++VCDI P+GLKM++TFIGNST+I
Sbjct: 315 AVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVCDIAPKGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (385), Expect = 2e-39
Identities = 74/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
AVFRG+MS KEVDEQMMN+QNKNSSYFVEWIPNNVK++VCDI P GLKM++TFIGNST+I
Sbjct: 315 AVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 91.9 bits (218), Expect = 4e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 158 bits (384), Expect = 3e-39
Identities = 73/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+I
Sbjct: 315 AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 158 bits (384), Expect = 3e-39
Identities = 73/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+I
Sbjct: 315 AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 158 bits (384), Expect = 3e-39
Identities = 73/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+I
Sbjct: 315 AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 157 bits (382), Expect = 5e-39
Identities = 73/130 (56%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+I
Sbjct: 315 AMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (378), Expect = 2e-38
Identities = 72/130 (55%), Positives = 89/130 (68%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 255 VNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTAS 314
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDI PRGL M++TFIGNST+I
Sbjct: 315 AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSI 374
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 375 QEMFRRVSEQ 384
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT CLRFPG
Sbjct: 231 ATMSGVTCCLRFPG 244
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 155 bits (377), Expect = 2e-38
Identities = 70/130 (53%), Positives = 90/130 (69%)
Frame = -3
Query: 646 VNMVPVPAIALFHTGFRTSDVTRESAVPCXXXXXXXXXXX*REEHDAACDPRHGRYLTVA 467
VN++P P + F GF + A DPRHGRYLT +
Sbjct: 256 VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 315
Query: 466 AVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAI 287
A+FRG+MS KEVDEQ++N+QNKNSSYFVEWIPNNVK++VCDIPP G+KM++TF+GNST+I
Sbjct: 316 AMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPTGIKMASTFVGNSTSI 375
Query: 286 QELFKRISEQ 257
QE+F+R+SEQ
Sbjct: 376 QEMFRRVSEQ 385
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 254 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 132
TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 387 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 427
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2
Query: 722 ATMSGVTTCLRFPG 681
ATMSGVT LRFPG
Sbjct: 232 ATMSGVTCSLRFPG 245
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
++ + I N+TA+ E+F RI + AKR+++
Sbjct: 363 VPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+VPE+T +F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
++ + I N+TA+ E+F RI + AKR+++
Sbjct: 363 VPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 44.4 bits (100), Expect = 8e-05
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+VPE+T +F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
++ + I NST++ E+F RI + AKR+++
Sbjct: 363 VPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
++ + I NST++ E+F RI + AKR+++
Sbjct: 363 VPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYI 221
++ + I NST++ E+F RI + AKR+++
Sbjct: 363 VPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF-DLMYAKRAFV 405
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQ 257
++ + I N+TA+ E+F RI +
Sbjct: 363 VPGGDLAKVQRAVCMISNNTAVAEVFSRIDHK 394
Score = 48.0 bits (109), Expect = 6e-06
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = -2
Query: 248 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 138
M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 398 MYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 45.2 bits (102), Expect = 5e-05
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + +VPE+T +F+ NMM
Sbjct: 261 PYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMM 302
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Frame = -3
Query: 508 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP-- 335
A CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 303 AKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTV 362
Query: 334 ------RGLKMSATFIGNSTAIQELFKRISEQLRR 248
++ + I NST++ E K S++L R
Sbjct: 363 VPGGDLAKVQRAVCMISNSTSVAE--KENSQRLVR 395
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 508
P+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 261 PYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/79 (21%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = -3
Query: 484 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP---RGLKMSA 314
+Y+++ + +G + +V E + I+ + F+EW P +++ A+ P ++S
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377
Query: 313 TFIGNSTAIQELFKRISEQ 257
+ + T+I+ LF + Q
Sbjct: 378 LMLASHTSIRHLFSKCLSQ 396
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMM 508
P PR HF + G+ PLT R + R TV ++ +++ KN+M
Sbjct: 262 PTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 633 PFPRLHFFIPGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMM 508
P PR HF + G+ PLT R + R TV ++ +++ KN+M
Sbjct: 262 PTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
>At3g14230.3 68416.m01802 AP2 domain-containing protein RAP2.2
(RAP2.2) identical to AP2 domain containing protein
RAP2.2 GI:2281629 from [Arabidopsis thaliana]
Length = 374
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 322 MSATFIGNSTAIQELFKRISEQLRRCSGAKRS--YIGIRARVWTRWSS 185
+++ F+ +A + +EQ + S KR Y GIR R W +W++
Sbjct: 89 VASAFVSTGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAA 136
>At5g60120.1 68418.m07537 AP2 domain-containing transcription
factor, putative Similar to Floral homeotic protein
APETALA2 protein (SP:P47927) [Arabidopsis thaliana];
homolog HAP2, Hyacinthus orientalis, EMBL:AF134116
Length = 485
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = -3
Query: 370 NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQLRRCSGAKRSYIGIRARVW 200
N++ A CD P LK + + N A+ F E+ RS+ AR W
Sbjct: 349 NHMAAAACDTPFNFLKRGSDHLNNRHALPSAFFSPMERTPEKGLMLRSHQSFPARTW 405
>At5g41720.1 68418.m05073 F-box family protein contains Pfam
PF00646: F-box domain; similar to unknown protein
(gb|AAD32901.1);
Length = 186
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 505 ACDPRHGRYLTVAAVFRGRMSMKE 434
ACD HG L V VF+GR + +
Sbjct: 99 ACDTHHGILLCVDVVFKGRQKIPD 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,977,896
Number of Sequences: 28952
Number of extensions: 230575
Number of successful extensions: 744
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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