Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0313.Seq
(752 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59609| Best HMM Match : Tektin (HMM E-Value=0) 63 2e-10
SB_226| Best HMM Match : Tektin (HMM E-Value=0) 62 4e-10
SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.082
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 32 0.43
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 32 0.57
SB_34618| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 31 0.76
SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30) 31 1.3
SB_17672| Best HMM Match : ERM (HMM E-Value=0.13) 30 2.3
SB_36492| Best HMM Match : Sorb (HMM E-Value=4.2) 29 3.1
SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50623| Best HMM Match : NAD_Gly3P_dh_C (HMM E-Value=0) 29 4.1
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 29 5.4
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 5.4
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 29 5.4
SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9) 29 5.4
SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30) 28 7.1
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 28 7.1
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_40791| Best HMM Match : G2F (HMM E-Value=0.9) 28 7.1
SB_36184| Best HMM Match : UBA (HMM E-Value=2.4e-09) 28 7.1
SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001) 28 7.1
SB_23553| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06) 28 7.1
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5) 28 9.4
SB_6187| Best HMM Match : Ubie_methyltran (HMM E-Value=0.47) 28 9.4
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 28 9.4
SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9) 28 9.4
>SB_59609| Best HMM Match : Tektin (HMM E-Value=0)
Length = 402
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +1
Query: 262 EGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCR 441
E PL I Q+CL +REKR ++ VHD VE LLKEV ++ Q + +E+ +Q + R
Sbjct: 106 ELPLMIAQQCLMNREKRIKIDLVHDNVEMQLLKEVEVIEGVQALLKRTIEQATEQIRLLR 165
Query: 442 ATQHELETDMRNKEYALGIDS 504
+ ++ LE D ++K +A ID+
Sbjct: 166 SARYYLEKDRKDKFHANKIDN 186
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +2
Query: 17 YNESDAKRNFSERVRNDIMRVLRETDEIGTQGQRDSGRRIGERITDTTFWRNEVSIEMER 196
Y ++ +R +ER+R++ R+ E + + Q D +++ +RITD FW++E+
Sbjct: 24 YFTAEKERAAAERLRDESERLRVEIEVRTVETQEDVNKKLDQRITDINFWKSELDRNQSE 83
Query: 197 LVATCEKLSDTRRQLERAIA 256
+ + + +LERA+A
Sbjct: 84 TEEEINMMLNFKARLERALA 103
>SB_226| Best HMM Match : Tektin (HMM E-Value=0)
Length = 534
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 262 EGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCR 441
E PL+I Q+CL +RE+R ++ VHD VE L KEV ++ Q + +++ +Q R
Sbjct: 186 EKPLNISQQCLGYRERRVKIDLVHDNVETHLSKEVEMIENVQALLKKTMDQAHEQLWLLR 245
Query: 442 ATQHELETDMRNKEYALGID 501
+ + +LE D+ +K ALGID
Sbjct: 246 SAKTQLEKDLGDKYGALGID 265
>SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +1
Query: 268 PLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRAT 447
PL I ECL RE RQ ++ V D VE L KEV ++ + + +++ +Q +
Sbjct: 230 PLDITLECLMLRENRQSIDLVRDEVEAQLHKEVEVIEGTKALLQQKVDESFEQLCLLQEA 289
Query: 448 QHELETDMRNKEYALGID 501
+H+L D+ +K L ID
Sbjct: 290 RHQLHLDITDKFTTLQID 307
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 34.7 bits (76), Expect = 0.082
Identities = 25/83 (30%), Positives = 41/83 (49%)
Frame = +1
Query: 232 PTAGASHRGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLE 411
P A S R + L I+QE L R KR +EQ +V+Q L K+ AL + + ++ +
Sbjct: 38 PRATESKRALPS-LTIIQEELLKRAKRYAMEQ---SVQQVLAKQQALQAQQMNALQTAAQ 93
Query: 412 KVRQQSKNCRATQHELETDMRNK 480
K R + CR + ++R +
Sbjct: 94 KQRALALMCRVYVGSINFELREE 116
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 207 PAKS*ATPADSWSEP-SRHRGASSHCPGVSLSPGEKT-RFGASARHGGAVPPERGRLAAR 380
P+K+ AT A P S G+SS PG S PG T + GA++ AVP + G + +
Sbjct: 505 PSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKTGAASTK 564
Query: 381 VPGQVSQHA*KGTAAVQELPRDATRA 458
++ +A Q R A+++
Sbjct: 565 SGPSAAKPGSTKSAKSQANTRPASKS 590
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.9 bits (69), Expect = 0.57
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 207 PAKS*ATPADSWSEP-SRHRGASSHCPGVSLSPGEKT-RFGASARHGGAVPPERGRLAAR 380
P+K+ AT A P S G+SS PG S PG T + GA++ AVP + G + +
Sbjct: 1610 PSKTSATKATHAKNPKSAKPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKTGAASTK 1669
>SB_34618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 304 PGDRDTPGQCEEAPRCRDGSLQLSAGVAQLFAG 206
P + D GQ +EA DGSL V QLFAG
Sbjct: 277 PYEADLFGQIKEAKETSDGSLDFCKRVVQLFAG 309
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = -2
Query: 499 RSRAHTPCCACRSPARVASRGSSWTAAVPFQACCETCPGTLAARRPLSGGTAPPCRALAP 320
+ ++ +PC C++P +VA+ S+ C + G L R+ + P R A
Sbjct: 285 QGQSWSPCMVCKTPGKVAAATSATRPGTELVDCMDLVHGVLNTRKGRTSNLGNPTRDRAG 344
Query: 319 NL 314
L
Sbjct: 345 RL 346
>SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30)
Length = 285
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 LSPGEKTRFGASARHGGAVPPERGRLAARVPGQVSQHA*KGTAAVQELPRDATRAGDRHA 473
L P E+ R AV RG L R +S A T ++ +P DRHA
Sbjct: 30 LEPQERARKATKCESRPAVQ-YRGNLRTRTQS-LSAVAWTSTGILKRIPTPKPHP-DRHA 86
Query: 474 QQGVCARDRL-HV 509
+GV RDRL HV
Sbjct: 87 SRGVWVRDRLTHV 99
>SB_17672| Best HMM Match : ERM (HMM E-Value=0.13)
Length = 391
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/99 (24%), Positives = 37/99 (37%)
Frame = +1
Query: 229 PPTAGASHRGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSML 408
PP S H+ Q C EK +GLEQ TV + L + A + Q
Sbjct: 126 PPQVMVSQADSAMIAHLRQVCQERDEKAKGLEQELRTVREELERSQAAAHQAQQ------ 179
Query: 409 EKVRQQSKNCRATQHELETDMRNKEYALGIDSMFTSSII 525
R Q+ + H+L + N D+M + ++
Sbjct: 180 ---RPQTATIACSTHDLPSQSTNDSTNQSADAMVSRDVM 215
>SB_36492| Best HMM Match : Sorb (HMM E-Value=4.2)
Length = 453
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/113 (24%), Positives = 44/113 (38%)
Frame = +2
Query: 179 SIEMERLVATCEKLSDTRRQLERAIAASRGLFTLSRSVSITGRKDKVWSKCTTRWSSPS* 358
S E +R C SD R ++ + G+ SRS+ +T R+ + + R +
Sbjct: 207 SRESKRSDRHCASCSDLRCSIDNELQG--GILQPSRSLELTSRRQHL----SVRLLASQE 260
Query: 359 KRSPCCESARTSFAACLKRYGSSPRTAARRNTSWRPTCATRSMRSGSTPCSPA 517
+ PC E+ R F +YG R R +R +TP PA
Sbjct: 261 RHQPC-EALRRRFLHEAGQYGGRDTQLRGRRQRGPREARLRLLRETTTPHIPA 312
>SB_17985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 328 VHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKEYALGI 498
V + V++ K L +EC D R L++V + H+L N+E AL I
Sbjct: 278 VAECVKEERKKTTTLGKECSD-LREKLKEVTAEKNKLEEENHQLHEHYANQEAALQI 333
>SB_50623| Best HMM Match : NAD_Gly3P_dh_C (HMM E-Value=0)
Length = 358
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Frame = +3
Query: 39 GIFLKESGTTLCGC*GKPTKLVPKDKGTPGGELAKE*QTLRFG-GTRSLSRWNAWLRPAK 215
G+ ++G TL K +P+ G LAKE FG T + ++ W+ PA
Sbjct: 101 GLDHTKTGLTLVSNVIKEALDLPEVSVLMGANLAKEVARELFGEATIGIVFFSGWIEPAL 160
Query: 216 S*ATPADSWSEPSRHRGASSHCPGVSLSPGE 308
+SW R S G S+ P E
Sbjct: 161 HVYEVENSWKNRRTFRAISREICGQSMEPFE 191
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = +2
Query: 20 NESDAKRNFSERVRNDIMRVLRETDEIG--TQGQRDSGR---RIGERITDTTFWRNEVSI 184
N D +R ER RN R + DE G Q RD GER TD T R+
Sbjct: 2867 NHEDPRRGTYERERNR-NRDRYDGDEKGDSVQSNRDGNHDRGTHGERSTDPTSLRHHRKQ 2925
Query: 185 EMERLVATCEK 217
E + A C+K
Sbjct: 2926 EQTGMYAKCQK 2936
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 307 SPGDRDTPGQCEEAPRCRDGSLQLSAGVAQLFAGRNQAFHLDRDLVPPKRS 155
SP RD +C+ A G + L +G + A N+ ++DR + PP S
Sbjct: 1366 SPTIRDKSLECKRALMDDTGHVLLRSGAQRPVANSNRDSYIDRLISPPAHS 1416
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/51 (23%), Positives = 30/51 (58%)
Frame = +1
Query: 346 QSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKEYALGI 498
Q++LK+ + + + ++++ +R+QSK C+ +TD+ +KE + +
Sbjct: 808 QAMLKKHEAIMSDLEAYSTVIDGLREQSKECKTVSQ--DTDISDKECVVAL 856
>SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 502 SRSRAHTPCCACRSPARVASRGSSW 428
S +R+ TPCC C S + R +W
Sbjct: 2 STARSTTPCCRCLSTRTTSGRSIAW 26
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 406 LEKVRQ-QSKNCRATQHELETDMRNKEYALGIDSMFTSSIIFRRGYSTTP 552
L+K+ Q K RAT H+ D KE A ID S I RRG P
Sbjct: 101 LKKITQVNKKKLRATHHKAILDEIMKEKAKEIDVKKERSTISRRGKKREP 150
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +2
Query: 11 KNYNESDAKRNFSERVRNDIMRVLRETDEIGTQGQRDSGRRIGERITDTTFWRNEVSIEM 190
K Y +DA + + + R R T++ +G D+G +G T+ + I+
Sbjct: 1007 KKYKSADANSSINSKGRRGTSRKADNTEKCSDEGVDDNGGSMGYNTTNPNDSSKKTKIKN 1066
Query: 191 ERLVATCEKLSDTRRQLERAIAASRGLFTLSRSVSITGRKDK 316
+ + E L D + + I+ S L + S I G+K+K
Sbjct: 1067 KNVKKQNESL-DAKEPV--YISDSSNL-SSPNSYQIVGKKEK 1104
>SB_32192| Best HMM Match : Guanylin (HMM E-Value=4.9)
Length = 160
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 229 PPTAGASHRGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKEVALLRECQDK 393
PP S H+ Q C EK +GLEQ TV + L + A + Q +
Sbjct: 18 PPQVMVSQADSAMIAHLRQVCQERDEKAKGLEQELRTVREELERSQAAAHQAQQR 72
>SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 359 KRSPCCESARTSFAACLKRYGSSPRTAARRNTSWRPTCATRSMRSGST 502
+ C C++R G S T RRN TC RS R+ T
Sbjct: 496 RNGTCVRRNGRDHVTCVRRNGRSHVTCVRRNGRAHVTCVRRSGRAHVT 543
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 371 CCESARTSFAACLKRYGSSPRTAARRNTSWRPTCATRSMRSGST 502
C S C++R G + T RRN TC RS R+ T
Sbjct: 566 CVRCNGRSHVTCVRRNGRAHVTCVRRNGRAHVTCVRRSGRAHVT 609
>SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 358 KEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNK 480
++ AL QD++R + +V ++ K+CR+ ++ T R K
Sbjct: 592 RQKALAEGNQDQYRKLRNRVNRERKSCRSKYYDACTWWREK 632
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.3 bits (60), Expect = 7.1
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = +1
Query: 34 EEEFF*KSQERHYAGVKGNRRNWYPRTKGLRAENWRKNNRHYVLEERGLYRDGTLGCDLR 213
EEE K +E + R R K L + + R ++E++ R + R
Sbjct: 1442 EEERLRKEEEERKMEEERRRDEQARRDKELEDQKRKDEERRLIMEQQERERRQEMEYLQR 1501
Query: 214 KAERHPPTAGASHRGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLK------EVALL 375
+ E A + +E ++ L REK +E+ E+ +++ E
Sbjct: 1502 EKEERLRVEEALKK-LEREKEEERQRL-EREKELEIERQLKIKEKEVIRLQRERDEERRR 1559
Query: 376 RECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKE 483
RE ++K R +EKV + + R + ELE MR KE
Sbjct: 1560 REDEEK-RIQMEKVEELKRIEREKEEELERQMREKE 1594
>SB_12468| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-30)
Length = 824
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +1
Query: 301 REKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNK 480
+EK + L + D + + L+ C D FR LE V+ HE E D +K
Sbjct: 302 KEKEKTLTEERDKAITAASASMEKLKSCDDAFRRQLESVKH--------SHEKEVDRIHK 353
Query: 481 EYALGID 501
E +D
Sbjct: 354 EKQSELD 360
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 SERVRNDIMRVLRETDEIGTQGQR-DSGRRIGERITDTTFWRNE-VSIEMERLVATCEKL 220
+ERV + RV +ET+ + + +R + R+ + T+ E V+ E ER+ E+L
Sbjct: 180 TERVNKETERVNKETERVNKERERVNKERKRANKETERVNKETERVNKERERVNKKKERL 239
Query: 221 SDTRRQLER 247
+ + QL +
Sbjct: 240 NKEKEQLNK 248
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 SERVRNDIMRVLRETDEIGTQGQR-DSGRRIGERITDTTFWRNE-VSIEMERLVATCEKL 220
+ERV + RV +ET+ + + +R + R+ + T+ E V+ E ER+ E+L
Sbjct: 439 TERVNKETERVNKETERVNKERERVNKERKRANKETERVNKETERVNKERERVNKKKERL 498
Query: 221 SDTRRQLER 247
+ + QL +
Sbjct: 499 NKEKEQLNK 507
>SB_40791| Best HMM Match : G2F (HMM E-Value=0.9)
Length = 535
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 ITGRKDKVWSKCTTRWSSPS*KRSPCCESARTSFAACL-KRYGSSPRTAARRNTSWRPTC 472
+T R+ + + C+ RW P ++R AC K Y + A WRP
Sbjct: 367 LTERRKRHFVSCSRRW--------PRGRASRRDARACAPKAYTHQSQKATLLGRRWRPHS 418
Query: 473 ATRSMRSGSTP 505
R RSG P
Sbjct: 419 RPRICRSGDLP 429
>SB_36184| Best HMM Match : UBA (HMM E-Value=2.4e-09)
Length = 1337
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 334 RALAPNLVFSPGDRDTPGQCE 272
R+L P L+FS DRDTPG+C+
Sbjct: 1276 RSLTP-LLFSFIDRDTPGRCQ 1295
>SB_24349| Best HMM Match : Exo_endo_phos (HMM E-Value=0.001)
Length = 534
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 358 KEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETD 468
++ AL QD++R + +V ++ K+CR+ +E + +
Sbjct: 366 RQKALAEGNQDQYRKLRNRVNRERKSCRSKYYEAKVE 402
>SB_23553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 28.3 bits (60), Expect = 7.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 505 WSRSRAHTPCCAC 467
W + R HTPCC C
Sbjct: 456 WFKLRRHTPCCVC 468
>SB_9753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 358 KEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETD 468
++ AL QD++R + +V ++ K+CR+ +E + +
Sbjct: 347 RQKALAEGNQDQYRKLRNRVNRERKSCRSKYYEAKVE 383
>SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06)
Length = 773
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 358 KEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNK 480
++ AL QD++R + +V ++ K+CR+ ++ T R K
Sbjct: 303 RQKALAEGNQDQYRKLRNRVNRERKSCRSKYYDACTWWREK 343
>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
Length = 402
Score = 27.9 bits (59), Expect = 9.4
Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Frame = +2
Query: 128 RRIGERITDTTFWRNEVSIEMERLVATCE-----KLSDTRRQLERAIAASRGLFTLSRSV 292
R I T+ WR+E E E + E KL +E + S T RS+
Sbjct: 256 REIEPEQASTSTWRDEKDEEEEEAAESQEGEQAIKLFSEEDLMEEDKSTSCIPHTKDRSI 315
Query: 293 SITGRKDKVWSKCT--TRWSSPS*------KRSPCCESARTSFAACLKRYGSSPRTAARR 448
T + CT T+ S S + +PC + +C + T+
Sbjct: 316 PCTPHTKDRSTPCTPHTKDRSTSCTPHTKDRSTPCTPHTKDRSTSCTP-HTKDKSTSCTP 374
Query: 449 NTSWRPTCATRSMRSGSTPCSP 514
+T R T T + STPC+P
Sbjct: 375 HTKDRSTSCTLHTKDRSTPCTP 396
>SB_6187| Best HMM Match : Ubie_methyltran (HMM E-Value=0.47)
Length = 431
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 340 VEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKEYA 489
+++ L KE A L QD+ ++ LEK R+Q + QH+L +R +A
Sbjct: 10 LQKLLEKEEARLE--QDRKKAALEKRRKQQQEKFQLQHQLNHPLRQHHHA 57
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 146 ITDTTFWRNEVSIEMERLVATCEKLSDTRRQLERAI 253
+ D FW N+ + + + EKL +T +L+R I
Sbjct: 666 VADREFWENQEEERVRKAIEEHEKLVETSARLQRMI 701
>SB_9076| Best HMM Match : Gas_vesicle_C (HMM E-Value=0.9)
Length = 305
Score = 27.9 bits (59), Expect = 9.4
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Frame = +1
Query: 280 VQECLYH--REKRQG----LEQV--HDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKN 435
V E +YH E++ G L+Q+ TV ++LLKE ALL++ R K + + K+
Sbjct: 189 VTEEMYHLMNERKDGDDLILKQLPSFSTVNENLLKEGALLQQLITSVRDARNKNQLKPKD 248
Query: 436 CRATQHELETDMRNKEYALGIDSMFTSSIIFRRGYSTTPASSGT 567
+L D N+++ + M + I TT A GT
Sbjct: 249 ----TIKLWVDTTNEQFYTLVKPMLSRQINAEEIAFTTEAKQGT 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,173,053
Number of Sequences: 59808
Number of extensions: 542099
Number of successful extensions: 1941
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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