Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0313.Seq
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    27   0.62 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   0.62 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.1  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    26   1.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   4.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.7  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +1

Query: 133 NWRKNNRHYVLEERGLYRDGTLGCDLRKAERHPPTAGASHR 255
           NW  N  H   E RGL   G     L KA R+  T G S R
Sbjct: 149 NWICNAVHKHRELRGLTSAGKSSRGLGKAYRYSQTIGGSRR 189


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +1

Query: 355 LKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNKEYALG 495
           LK++ L ++C ++      + +Q+ +   A + ELET  + K+ A+G
Sbjct: 244 LKDLKLAKKCTEEKEQQYNQFKQEMEAILARKKELETS-KAKQVAIG 289



 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 185 EMERLVATCEKLSDTRRQLERAI 253
           E +RLV  C+K+ + R Q+E +I
Sbjct: 620 EHQRLVRECDKIRNQRGQIENSI 642


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 301 REKRQGLEQVHDTVEQSLLKEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRNK 480
           +  R GLE+    ++  L ++V   +E   + +S L+ VR+Q  + +  +HE   D R K
Sbjct: 453 KTSRLGLEE-QKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDKHE---DARRK 508

Query: 481 E 483
           +
Sbjct: 509 K 509


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 374 CESARTSFAACLKRYGSSPRTAARRNTSWRPTC 472
           C + R +F   L +   + RTAARRN S R TC
Sbjct: 136 CVNIRNNFH--LPKSNRNCRTAARRNHSSRNTC 166


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  ADSWSEPSRHRGASSHCPGVSLSPGEKTRFGASARHGGAVPP 356
            + S  + S H G +S     ++SPGEK   G     GG  PP
Sbjct: 970  SSSSGKKSSHSGTNSSKRKKTVSPGEKKDRGGPMAAGG--PP 1009


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 367 RPLSGGTAPPCRALAPNLVFSPGDRDTPGQCEEA 266
           R LS    P CR   PNL+  P +  T  + + A
Sbjct: 94  RSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSA 127


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 85  GNRRNWYPRTKGLRAENWRKNNRHYVLEERGLYRDGTLGCDLRKAE 222
           G R+      +GLR+E  R+N   + L+    YRD   G D R  +
Sbjct: 480 GRRQALQQEVRGLRSELDRRNAHRWELQ----YRDPEPGFDRRSVK 521


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,387
Number of Sequences: 2352
Number of extensions: 16449
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)