Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0313.Seq
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.76 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   7.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
            receptor 1 protein.
          Length = 953

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +1

Query: 358  KEVALLRECQDKFRSMLEKVRQQSKNCRATQHELETDMRN--KEYALGIDSMFTSSIIFR 531
            K++ L R   DK+R  +EK R+  +   A Q  ++++  N     +L +D++  S++  R
Sbjct: 856  KKMELARHAADKWRGAIEK-RKTLRASIAAQRRIQSNGLNDPTTVSLAVDTVARSNVTPR 914

Query: 532  RGYSTTPASS 561
                  P  S
Sbjct: 915  SPGRAWPGDS 924


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -1

Query: 377 RSKATSFRR-DCSTVSCTCSKP 315
           R+K+   RR +C T S TC +P
Sbjct: 250 RAKSIRARRTECVTNSVTCDRP 271


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 253 RGIEGPLHIVQECLYHREKRQGLEQVHDTVEQSLLKE 363
           R I   LH+   C+ +  K+ G  Q  DT     LKE
Sbjct: 87  REIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKE 123


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 8   IKNYNESDAKRN 43
           I+N+NES+ +RN
Sbjct: 366 IRNFNESENRRN 377


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,731
Number of Sequences: 438
Number of extensions: 4422
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)