Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0311.Seq
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   4.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   5.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 18  DVQGDDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 176
           D  GD GRPAY    D +  +V        +  ++Y   L TE ++ L+ G G
Sbjct: 101 DRNGDGGRPAYSGNSDPSMDQVKTD-----KPRELYIPPLPTE-DESLIFGSG 147


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 92  LPADSRACLVLAVAVGRSAIVALNIIAQ 9
           LP DS   L L V +  S  V LN++A+
Sbjct: 255 LPPDSGEKLTLGVTILLSLTVFLNLVAE 282


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 166 WESALTGTATIWPS 207
           W S  TGTA IW S
Sbjct: 45  WVSDSTGTAAIWAS 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,278
Number of Sequences: 2352
Number of extensions: 8606
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)