Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0310.Seq
(744 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 35 0.061
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.061
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 34 0.11
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.3
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 30 1.7
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 29 3.0
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_50536| Best HMM Match : Mycobact_memb (HMM E-Value=5.3) 29 4.0
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 29 4.0
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 29 5.3
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.3
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 28 9.2
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.2
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 28 9.2
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDFNK 626
GGSLIHP VLTA H V+ R G R QD V++I++H + K
Sbjct: 691 GGSLIHPQWVLTATHCVSSRRPTDLNIRLGAHNRRANLGMEQDIKVEKIIMHPGYRK 747
Score = 37.1 bits (82), Expect = 0.015
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Frame = +3
Query: 447 YVGGGSLIHPNVVLTAAHYVAPPRN*RS-EPANGTRRTRRRYIPYQDRTVKEIVIHKDFN 623
++ GGSL+ P V+TAAH +A + S + G Q VK I+ H +N
Sbjct: 91 FICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYN 150
Query: 624 KGNCSTT*LCCSFETSIGFQPR----NVGMACLPXGQGKRRPP 740
S + + R +VG C G GK R P
Sbjct: 151 SPQLSNDIALIELSSPVPLSDRGHQVSVGSKCFITGWGKIRHP 193
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 35.1 bits (77), Expect = 0.061
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYV--APPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDF-NK 626
GG+L+HP V+TA+H + P + R RR QD VK I+ H+ + N
Sbjct: 51 GGTLVHPRFVVTASHCIDKKTPSSLRIR-LGAHRRAESGESTVQDFRVKRIIKHERYSNP 109
Query: 627 GNCSTT*LCCSFETSIGFQPRNVGMACLP 713
N + E R V +ACLP
Sbjct: 110 VNLANDIAVIELEEPARLN-RAVNLACLP 137
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.1 bits (77), Expect = 0.061
Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 1/163 (0%)
Frame = +3
Query: 228 GSRPETANRPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILKVEP 407
G +P T P T RP P CG+ P + R G D G +PW +A+
Sbjct: 445 GGQPNTPQPP-TNRPTAPPGGLKCGY-TPITQS-RVIGGKDAIP--GAWPWQIAL----- 494
Query: 408 VDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYVAPPRN-*RSEPANGTRRTRRRYIPYQD 584
+ G ++ GGSL+ V+TAAH VA N + + G + +
Sbjct: 495 ----KSRGN----FICGGSLVSSTWVVTAAHCVARSSNPAQYQIIVGEHNRNVNEVTEET 546
Query: 585 RTVKEIVIHKDFNKGNCSTT*LCCSFETSIGFQPRNVGMACLP 713
VK+++ H +N S + R V CLP
Sbjct: 547 LNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSR-VNPVCLP 588
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 35.1 bits (77), Expect = 0.061
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 447 YVGGGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDFNK 626
++ GGSLI P VLTAAH V P R + R Q+ + ++ HKDF+
Sbjct: 104 HICGGSLITPEWVLTAAHCV------EDFPHPSAHRIKERSAIQQEFRLTKLFKHKDFSM 157
Query: 627 GNCSTT*LCCSFETSIGFQPRN-VGMACLP 713
+ + I QP + V CLP
Sbjct: 158 SHLKNDVALLKLDNPI--QPSDKVNTVCLP 185
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 34.3 bits (75), Expect = 0.11
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +3
Query: 219 LLSGSRPETANRPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILK 398
L + ++P T P P ++P CG R P A R G D GE+PW ++
Sbjct: 179 LPTSAKPTTPTSPPVPPVPSVP---NCGVRPP---ASRIVGGNDA--MHGEWPWQAMLMF 230
Query: 399 VEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYV--APPRN*RSEPANGTRRTRRRYI 572
P+ G K GG+L+H + V+TA+H + P + ++ + + +
Sbjct: 231 QTPL------GYK---QFCGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKTGIM 281
Query: 573 PYQDRT-VKEIVIHKDFN 623
+ R + +I +H D+N
Sbjct: 282 SVEQRIGIAKIYLHADYN 299
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*RSEPANGTR-RTRRRYIPYQDRTVKEIVIHKDFN 623
GGSLIH N VLTAAH ++ R G R QD V I+ H ++N
Sbjct: 418 GGSLIHSNWVLTAAHCISSKRPAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYN 474
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +3
Query: 387 AILKVEPVDDNEPEGQK--LNVYVGGGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTR 560
A L V P+ ++ EG K + G+ IHP V+ HY+ P + +S P+
Sbjct: 565 APLSVHPLPPSDTEGAKSAFSTIAKSGTFIHPRVMKPKEHYIKSPTS-KSPPSKSAFHPH 623
Query: 561 RRYI--PYQDRTVKE 599
Y P T+KE
Sbjct: 624 PSYAAHPIASPTMKE 638
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 31.9 bits (69), Expect = 0.56
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDFNK 626
GG+L+HP V+TAAH V + G + Y QD ++ ++ H ++K
Sbjct: 167 GGTLVHPQWVITAAHCVYRRGPNDFKIRMGAHFRKGDYGTEQDFSLSRVITHPSYHK 223
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 31.5 bits (68), Expect = 0.75
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 649 SYVVEQFPLLKSLCITISLTVLS*YGIYLLRVLRVPFAG 533
S V + P+ SL + SL L G+Y R+PFAG
Sbjct: 88 SVVPPELPIELSLAVNSSLMALQKLGVYCTEPFRIPFAG 126
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 30.7 bits (66), Expect = 1.3
Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +3
Query: 243 TANRPITPR-PETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILKVEPVDDN 419
T P+T R P T P + CG + P G R G E +PW A+L+
Sbjct: 192 TTKVPVTTRAPITQPPSGSCGSK-PSGT--RIVGGT--EAPVNGWPWQ-AMLR------- 238
Query: 420 EPEGQKLNVYVGGGSLIHPNVVLTAAH 500
G + GGSLIHP VLTAAH
Sbjct: 239 SAGGSQFC----GGSLIHPEWVLTAAH 261
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAH 500
GGSLIHP VLTAAH
Sbjct: 287 GGSLIHPEWVLTAAH 301
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVA 509
GGSLIHP +LTA H V+
Sbjct: 81 GGSLIHPQWILTATHCVS 98
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 113 STITCAMRPITPLSLTEQTSSI*ESAVARVHR-TSTSAVWLPTRDRQQTHHAQAGDPA 283
S TCA + TP S T TS + R R TST A+ R QTH Q +P+
Sbjct: 3600 SQTTCAEQQSTPSS-TSMTSLHTDPNATREERVTSTKALAPVASQRVQTHSVQEQEPS 3656
>SB_50536| Best HMM Match : Mycobact_memb (HMM E-Value=5.3)
Length = 462
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +1
Query: 208 YIDVCCLAPDQRPP--TDPSRPGRR 276
Y+DVCCL D+ P TDP G R
Sbjct: 315 YLDVCCLRQDEFPANITDPQIEGHR 339
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDFN 623
GGSLI P VLTAAH + + S R+ + +D V +I+ HK+++
Sbjct: 58 GGSLIDPGWVLTAAHCLVGEQP-DSALLGAHYRSNKTVGTEKDIKVAQIIPHKNYH 112
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*RSEPANGTRRTRRRYIPYQDRTVKEIVIHKDFNK 626
GGSLI P +LTA H V + G RR +D V +++ H ++K
Sbjct: 38 GGSLIAPQWILTATHCVERKQASSIVIRLGARRRVATVGTEKDYIVTKVITHPSYHK 94
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +3
Query: 456 GGSLIHPNVVLTAAHYVAPPRN*R 527
GGSLI VLTAAH VA RN R
Sbjct: 69 GGSLIDSEWVLTAAHCVAGIRNPR 92
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.7 bits (61), Expect = 5.3
Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 8/173 (4%)
Frame = +3
Query: 216 RLLSGSRPETANRPITPRPET----LPMNQG-CGWRNPDGVAFRTTGDVDGET-KFGEFP 377
R ++G P T P P P + LP + G CG R P G ++G+ + +P
Sbjct: 65 RRITGGAPSTPAPPPPPPPPSSGPPLPPSNGKCG-RKPAGARI-----INGQNAQPHSWP 118
Query: 378 WMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYVAPPRN*RS-EPANGTRR 554
W +++ G+ + GGSLI V+TAAH + +N G +
Sbjct: 119 WQISL-----------RGRS-GFHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHK 166
Query: 555 TRRRYIPYQDRTVKEIVIHKDFNKGNCSTT*LCCSFETSIGFQPR-NVGMACL 710
R Q + +I+ H +N T + F VG CL
Sbjct: 167 KRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCL 219
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 354 ETKFGEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYVAP 512
E K G+FPW +A+L K Y GG+L+H V+T AH P
Sbjct: 34 EAKAGQFPWQIALL------------FKRQQYC-GGALVHERWVVTGAHCFNP 73
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 311 VPPAAALVHWQGLRPGRDGSVGGLWSGARQQTSMYDEHGPL 189
+P A L+H Q L +VG + +G +QT + HG L
Sbjct: 848 LPALALLIHHQDLDTAALRAVGNIVTGTDEQTQVVLNHGAL 888
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 366 GEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYV 506
G +PW VA L+ + N N + GG+LI + VLTAAH V
Sbjct: 1170 GGYPWQVA-LEFDTFQSN------YNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 303 WRNPDG---VAFRTTGDVDGETKFGEFPWMVAILKVEPVDDNEP 425
WR +G VA T GD+ E + PW+V + D NEP
Sbjct: 4088 WRFNEGEGAVAIDTVGDI--EMELASSPWLVPSWEFSDADMNEP 4129
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 447 YVGGGSLIHPNVVLTAAHYV 506
++ GGSLI P VLTAAH V
Sbjct: 61 HICGGSLITPEWVLTAAHCV 80
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 165 CSVSDNGVIGRIAQVIVDALPFLAVGGLARKVIVRR 58
C+VS+N V+G I ++ P L GG+ I+ R
Sbjct: 1903 CNVSENAVVGAIIAELLAVDPDLGTGGVVSYRILTR 1938
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Frame = +3
Query: 366 GEFPWMVAILKVEPVDDNEPEGQKLNVYVGGGSLIHPNVVLTAAHYVAPPRN*RSEPAN- 542
G +PW VA+L ++D + V GSLI ++TA H PR+ ++P
Sbjct: 63 GLWPWQVALL----LNDRQ---------VCAGSLIEARWIITAGHCFKDPRS-SADPDKW 108
Query: 543 ----GTRR--TRRRYIPYQDRTVKEIVIHKDFN 623
G RR + +R+ + + VK I++H FN
Sbjct: 109 KVLLGERRRHSSKRHFE-RAQQVKRIIVHPKFN 140
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,804,020
Number of Sequences: 59808
Number of extensions: 547526
Number of successful extensions: 1741
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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