Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0309.Seq
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g27800.3 68417.m03994 protein phosphatase 2C PPH1 / PP2C PPH1...    32   0.35 
At4g27800.2 68417.m03993 protein phosphatase 2C PPH1 / PP2C PPH1...    32   0.35 
At4g27800.1 68417.m03992 protein phosphatase 2C PPH1 / PP2C PPH1...    32   0.35 
At4g20080.1 68417.m02937 C2 domain-containing protein contains I...    29   4.3  
At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family ...    29   4.3  
At4g18180.1 68417.m02701 glycoside hydrolase family 28 protein /...    27   10.0 
At3g09780.1 68416.m01161 protein kinase family protein contains ...    27   10.0 

>At4g27800.3 68417.m03994 protein phosphatase 2C PPH1 / PP2C PPH1
           (PPH1) identical to SP|P49599|P2C3_ARATH Protein
           phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
           thaliana}; similar to protein phosphatase-2C; PP2C
           (GI:3643090) [Mesembryanthemum crystallinum]
          Length = 326

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 641 HLHSFYEQTLRWVCDPNTDVGGSFLFNPT 727
           HLH F+  TLR    P+ D GG  +  PT
Sbjct: 7   HLHRFHSNTLRHSAYPSADAGGGLVVYPT 35


>At4g27800.2 68417.m03993 protein phosphatase 2C PPH1 / PP2C PPH1
           (PPH1) identical to SP|P49599|P2C3_ARATH Protein
           phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
           thaliana}; similar to protein phosphatase-2C; PP2C
           (GI:3643090) [Mesembryanthemum crystallinum]
          Length = 335

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 641 HLHSFYEQTLRWVCDPNTDVGGSFLFNPT 727
           HLH F+  TLR    P+ D GG  +  PT
Sbjct: 7   HLHRFHSNTLRHSAYPSADAGGGLVVYPT 35


>At4g27800.1 68417.m03992 protein phosphatase 2C PPH1 / PP2C PPH1
           (PPH1) identical to SP|P49599|P2C3_ARATH Protein
           phosphatase 2C PPH1 (EC 3.1.3.16) (PP2C) {Arabidopsis
           thaliana}; similar to protein phosphatase-2C; PP2C
           (GI:3643090) [Mesembryanthemum crystallinum]
          Length = 388

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 641 HLHSFYEQTLRWVCDPNTDVGGSFLFNPT 727
           HLH F+  TLR    P+ D GG  +  PT
Sbjct: 7   HLHRFHSNTLRHSAYPSADAGGGLVVYPT 35


>At4g20080.1 68417.m02937 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 774

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -2

Query: 318 DGVFSRSILKTEHYKITNHSMIMNNSELRVSLRLWYYYLNVI 193
           D VFS +   ++   +T  +++   S++ +S RLWY  +NVI
Sbjct: 170 DEVFSEA-WHSDSASVTGENVVNTRSKVYLSPRLWYLRVNVI 210


>At1g68750.1 68414.m07859 phosphoenolpyruvate carboxylase family
           protein / PEP carboxylase family protein similar to
           SP|P51059 Phosphoenolpyruvate carboxylase 2 (EC
           4.1.1.31) (PEPCASE) {Zea mays}; contains Pfam profile
           PF00311: phosphoenolpyruvate carboxylase
          Length = 1032

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 458 EEEIKNVQDKEEPVSCSHYRLIFYKQSPNNLYKHRRGLQQDL 583
           EE+ +N+ ++   +SC HYR   Y+      Y H    Q +L
Sbjct: 804 EEKWRNLMEEISGISCQHYRSTVYENPEFLSYFHEATPQAEL 845


>At4g18180.1 68417.m02701 glycoside hydrolase family 28 protein /
           polygalacturonase (pectinase) family protein similar to
           polygalacturonase [Salix gilgiana] GI:6714524; contains
           PF00295: Glycosyl hydrolases family 28
           (polygalacturonases)
          Length = 414

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 584 ANPVEDLSCACISCWETACKKSICSVN 504
           AN   D + A ++ W+ ACK S  SVN
Sbjct: 44  ANDHRDHTKAFVAAWDKACKSSSSSVN 70


>At3g09780.1 68416.m01161 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 775

 Score = 27.5 bits (58), Expect = 10.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 394 NRICSPCH*CTNTS*SLVC 450
           +RIC+PC  C N+S S +C
Sbjct: 403 DRICTPCSLCQNSSCSDIC 421


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,234
Number of Sequences: 28952
Number of extensions: 263971
Number of successful extensions: 631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)