Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0308.Seq
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    27   0.16 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +1

Query: 496 WTLMSAENLSTVGPIQRSKWLFTQRKTVLSIRRWL 600
           W   +AEN    G +  S W    R    +IR WL
Sbjct: 208 WAGFTAENSPLYGGVNESDWQQQNRNADAAIRYWL 242


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 496 WTLMSAENLSTVGPIQRSKWLFTQRK 573
           + L S     T+G +   KWLF ++K
Sbjct: 307 YCLFSTHFCRTLGSLPPFKWLFKKKK 332


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +1

Query: 430 FVHKSIYVFILWVKQWESPVKCWTLM 507
           F+  ++++FILWV    +   C T++
Sbjct: 151 FIFDNVWLFILWVGILSTIFLCDTIL 176


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 623 SNLDKRTASHRRIDSTVF 570
           SNLDK    HR +D   F
Sbjct: 330 SNLDKDAFIHRTVDDYFF 347


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 344 SRISKQFYFQIARSKGP 294
           S IS+ FY+  A S GP
Sbjct: 59  SEISENFYYLPAMSTGP 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,553
Number of Sequences: 336
Number of extensions: 3504
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)