Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0307.Seq
(500 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 1.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 5.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 7.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.5
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAE 313
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 92 LPADSRACLVLAVAVGRSAIVALNIIAQ 9
LP DS L L V + S V LN++A+
Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAE 313
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 96 IALWEN--NKVYFKILNTERNQYLVLGVGTNWNGDHMAFGVNSVDS 227
IA W + N++ L+TE+ + T W HM+ +++DS
Sbjct: 177 IASWSHGSNEIKLNSLDTEQILDDMYNNNTEWEIVHMSHSESTIDS 222
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 5.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 251 LQVPLGSETIDAVDSEGHMVAVPVSADSQYQVLVT 147
L+ P+G+E+ V S G + + D + Q+L+T
Sbjct: 38 LERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLIT 72
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 36 GRPAYGDGKDKTSPRVS 86
G P GDG + SP+ S
Sbjct: 333 GTPGSGDGDTEISPQTS 349
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 129 KILNTERNQYLVLGVGTNWN 188
++ NT+RN+YL+ N N
Sbjct: 366 RVNNTQRNEYLLALSDRNQN 385
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 385 TSDYSAVVSPGHAVTRGL 332
T +YS GHA+ +GL
Sbjct: 260 TYNYSMYWGQGHAILKGL 277
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,177
Number of Sequences: 438
Number of extensions: 2668
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -