Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0306.Seq
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   4.3  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   5.7  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   5.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 360 RCIPRPCGDPRAQPSSTVSKPCC 292
           +C+P   GDP A+P  +  +  C
Sbjct: 865 QCLPGHFGDPLAEPHGSCEECSC 887


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
 Frame = -1

Query: 363 CRCIPRPCGDPRAQPSSTVSKP----CCIHGCRCRTRRHCLLSRLQVPLGSETIDAVDSE 196
           C   P  C +     ++T +K     CC  G  C      +    + P    T+D   S 
Sbjct: 8   CFTNPTECNNTECIDTTTYAKKNLNYCCCRGSMCNREHKWIPEATKAPEMMHTVDHESSF 67

Query: 195 GHMVAVPVSADSQYQVVVT 139
             +  + V +     V +T
Sbjct: 68  WLIFIIGVGSSLVAMVAIT 86


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 158 WESALTGTATIWPS 199
           W S  TGTA IW S
Sbjct: 45  WVSDSTGTAAIWAS 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,852
Number of Sequences: 2352
Number of extensions: 9936
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)