Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0306.Seq
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128065-1|BAC87257.1|  821|Homo sapiens protein ( Homo sapiens ...    32   1.2  
AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated prot...    29   6.6  
AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated prot...    29   6.6  
AB076347-1|BAD01534.1|  282|Homo sapiens keratin associated prot...    29   6.6  
AK097197-1|BAC04974.1|  187|Homo sapiens protein ( Homo sapiens ...    29   8.8  
AB058676-1|BAB47409.1| 1140|Homo sapiens MEGF10 protein (KIAA178...    29   8.8  

>AK128065-1|BAC87257.1|  821|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46185 fis, clone TESTI4004917, moderately
           similar to Dynein beta chain, ciliary. ).
          Length = 821

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 429 NFIL*LRKPLYPKRNVRDFRLLCRCIPRPCGDPRAQPSSTVSKPCC 292
           + +L +R+ + P RN R  R    C P PCG P +   S  S+P C
Sbjct: 758 DLLLRIRRLVCPCRNSRPGRQTLPC-PPPCGWPASSTPSRSSRPSC 802


>AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -1

Query: 357 CIPRPCGDPRAQPSSTVSKPCCIHGC 280
           C P PC      P S VS PCC   C
Sbjct: 37  CAPAPCLTLVCTPVSCVSSPCCQAAC 62


>AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated protein
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -1

Query: 357 CIPRPCGDPRAQPSSTVSKPCCIHGC 280
           C P PC      P S VS PCC   C
Sbjct: 37  CAPAPCLTLVCTPVSCVSSPCCQAAC 62


>AB076347-1|BAD01534.1|  282|Homo sapiens keratin associated protein
           protein.
          Length = 282

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -1

Query: 357 CIPRPCGDPRAQPSSTVSKPCCIHGC 280
           C P PC      P S VS PCC   C
Sbjct: 37  CAPAPCLTLVCTPVSRVSSPCCQAAC 62


>AK097197-1|BAC04974.1|  187|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39878 fis, clone SPLEN2016045, moderately
           similar to Homo sapiens mRNA for Hrs. ).
          Length = 187

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -1

Query: 381 RDFRLLCRCIPRPCGDPRAQPSSTVSKPCCIHGCRCRTRRHCLLSRLQ 238
           R  R   RC P PC  PR  PSS   + C   G R  + R     +LQ
Sbjct: 62  RRSRCARRCPPSPCPTPRHVPSSRHPEAC---GLRTNSHRCLFCPQLQ 106


>AB058676-1|BAB47409.1| 1140|Homo sapiens MEGF10 protein (KIAA1780)
           protein.
          Length = 1140

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = -1

Query: 363 CRCIPRPCGDPRAQPSSTVS-KPCCIHGCRCRTRRHC 256
           C+C P   G   +QP       P CIH C C     C
Sbjct: 688 CQCYPGWIGSDCSQPCPPAHWGPNCIHTCNCHNGAFC 724


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,402,450
Number of Sequences: 237096
Number of extensions: 1389916
Number of successful extensions: 3186
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3186
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)