Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0306.Seq
         (492 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    30   0.79 
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical pr...    28   3.2  
U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    28   4.2  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   4.2  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    28   4.2  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    27   7.4  
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ...    27   7.4  

>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 30.3 bits (65), Expect = 0.79
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 402 LYPKRNVRDFRLLCRCIPRPCGDPRAQPSSTVSKPCC 292
           LY K    D  + C C+    G+P+   S+T  KP C
Sbjct: 83  LYDKVQCYDVSIYCWCVDELSGEPKLGSSTTRGKPKC 119


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -2

Query: 443 WFVVETLYYNLESLYT--PSVMFGTSDYSAVVSPGHAVT 333
           WFV++T+  N+ESL +     M+  + + A+V  G+  T
Sbjct: 260 WFVIQTIAVNIESLCSVFTIAMYNWTSHQAIVYGGYIET 298


>Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical
           protein K01D12.5 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -2

Query: 452 HSHWFVVETLYYNLESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQCQSLA 294
           +  +    T Y N++++  P  M+G++  S VVS G++ + G N+     ++A
Sbjct: 83  YPQYLPTHTGYSNIQTVGQPYQMYGSAPGSNVVSGGNSESYGYNQQAPVPTVA 135


>U41510-8|AAK39385.1|  493|Caenorhabditis elegans Hypothetical
           protein ZC449.5 protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -1

Query: 390 RNVRDFRLLCRCIPRPCGDPRAQPSSTVSKPCCIHGCRCRTRRHCLLSRLQVPLGSET-- 217
           R V +  L+ +C+ +       Q S TV   CC     C   ++CLL+R +  L S T  
Sbjct: 25  RRVTEIGLIEKCLTKAECSGMPQCSDTVLGGCC-----CLENKNCLLTRARRHLKSTTPA 79

Query: 216 IDAVDSEGHMVAV 178
            D  DSE     V
Sbjct: 80  TDDDDSEEETTTV 92


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 348 RPCGDPRAQPSSTVSKPCCIHGCRC 274
           + C  PR  P S    PC  + CRC
Sbjct: 53  KSCTHPRQPPFSQCKLPCIPYSCRC 77


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
           presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 413 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 306
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
           protein F07B7.12 protein.
          Length = 1900

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 413 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 306
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 351 PRPCGDPRAQPSSTVSKPCCIHGCRCRTRR 262
           P+PC  P   P    +  CC   C CR RR
Sbjct: 78  PKPCCQPAFGPCCPATPNCCPKPC-CRGRR 106


>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 109 KVYFKILNTERNHYLVLGIGTNWNGDH 189
           + YF++L+ E N Y+++    N +G H
Sbjct: 156 RAYFRVLSAEDNKYILIACHANLHGLH 182


>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
           protein C42C1.4a protein.
          Length = 1259

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 163 IGTNWNGDHMAFGVNSVDSFRAQWYLQPAK 252
           +  +W  +HM  G+   DSF A W + P K
Sbjct: 346 VNIHWMSNHMIVGI---DSFGAVWQIDPEK 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,136,776
Number of Sequences: 27780
Number of extensions: 207747
Number of successful extensions: 467
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)