Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0304.Seq
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 32 0.42
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 32 0.42
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.74
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.74
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 30 1.3
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 30 1.3
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 30 1.3
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 3.9
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 3.9
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 3.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 3.9
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 3.9
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 3.9
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 3.9
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 3.9
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 29 3.9
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 3.9
Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 28 5.2
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 27 9.1
AF003386-10|AAB54251.1| 189|Caenorhabditis elegans Hypothetical... 27 9.1
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 27 9.1
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES*DSETNSAA 628
R+ ++GFP ML +F RY +LA + +S+ A+
Sbjct: 715 RICRKGFPNRMLYPDFKHRYAILAADAAKESDPKKAS 751
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES*DSETNSAA 628
R+ ++GFP ML +F RY +LA + +S+ A+
Sbjct: 715 RICRKGFPNRMLYPDFKHRYAILAADAAKESDPKKAS 751
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES*DSETNS 622
R+ ++GFP L +F +RY LLA ES +T++
Sbjct: 716 RICRKGFPNRTLHPDFVQRYALLAADESIIGKTDA 750
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES*DSETNS 622
R+ ++GFP L +F +RY LLA ES +T++
Sbjct: 716 RICRKGFPNRTLHPDFVQRYALLAADESIIGKTDA 750
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES*DSETNS 622
R+ ++GFP L +F +RY LLA ES +T++
Sbjct: 716 RICRKGFPNRTLHPDFVQRYALLAADESIIGKTDA 750
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ GFP EFARRYR++ T E+
Sbjct: 731 RISAAGFPSRYPYEEFARRYRVIYTKEA 758
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ GFP EFARRYR++ T E+
Sbjct: 731 RISAAGFPSRYPYEEFARRYRVIYTKEA 758
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ GFP EFARRYR++ T E+
Sbjct: 731 RISAAGFPSRYPYEEFARRYRVIYTKEA 758
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ ++GFP L +F +RY +LA E+
Sbjct: 710 RICRKGFPNRTLHPDFVQRYAILAAKEA 737
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ ++GFP L +F +RY +LA E+
Sbjct: 710 RICRKGFPNRTLHPDFVQRYAILAAKEA 737
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 518 RLYKQGFPXHMLLSEFARRYRLLATSES 601
R+ ++GFP L +F +RY +LA E+
Sbjct: 713 RICRKGFPNRTLHPDFVQRYAILAAKEA 740
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1167 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1226
Query: 494 RIPTADA 514
T D+
Sbjct: 1227 LPATIDS 1233
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1084 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1143
Query: 494 RIPTADA 514
T D+
Sbjct: 1144 LPATIDS 1150
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1405 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1464
Query: 494 RIPTADA 514
T D+
Sbjct: 1465 LPATIDS 1471
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1405 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1464
Query: 494 RIPTADA 514
T D+
Sbjct: 1465 LPATIDS 1471
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1405 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1464
Query: 494 RIPTADA 514
T D+
Sbjct: 1465 LPATIDS 1471
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -2
Query: 640 PRRVCC*IRFGVLTLGCR*KTISSG-EFRQQHVX---GETLLVKPRRVSSWNPRNCDRRS 473
P +V C I+ + + C K S G E R V G+T+ V +SSW N +
Sbjct: 7 PEKVNCEIKVDGINVECTAKVTSDGVERRSLRVTFENGDTIFVTHNLISSWTFVNTQETT 66
Query: 472 GTLTS 458
T+ S
Sbjct: 67 DTMVS 71
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 320 RHEASLDRPASEVRCGRRGGHAAAVRHERSHVRVLSAREPTDRL--AR*RQRAAPTIAVP 493
R+ A + ++ CG GG+ H S R+ P R +++ PTIA P
Sbjct: 1100 RNRAGEAQSTVDINCGHTGGNFTDSFHPNSLHRIAELETPIQRAEPLPDKEKEVPTIAKP 1159
Query: 494 RIPTADA 514
T D+
Sbjct: 1160 LPATIDS 1166
>Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical
protein T02G6.2 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 117 RLGEGEPREPSHEEVSHITTGEPER 191
R+ G PR PS E SH+ TG R
Sbjct: 177 RVPAGRPRPPSKIETSHVVTGSLSR 201
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 508 SSWNPRNCDRRSGTLTSSGESVGR 437
SSWN DR +GT G SVGR
Sbjct: 105 SSWNKGTPDRGTGTTPRGGGSVGR 128
>Z93388-2|CAB07659.1| 369|Caenorhabditis elegans Hypothetical
protein T10C6.2 protein.
Length = 369
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 185 WLXCSNVRDFFVTGFSRLAFTQPVTSY-STGLVPCKCCNINCLACGAFLMRYCI*FG 18
WL V + G P +Y GL+ CC + L CG+F I FG
Sbjct: 73 WLELMTVTNLHTQGSLFTVVVDPDQAYLPDGLLQISCCKFSDLYCGSFATSLAI-FG 128
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 43 KKAPHARQFILQHLQGTNPVLYDVTGWVKASRENPVT 153
+K R F +QH G V Y++ GW+ +R+N T
Sbjct: 557 QKCSTIRHFYVQHYAGE--VHYNIDGWLDKNRDNVET 591
>AF003386-10|AAB54251.1| 189|Caenorhabditis elegans Hypothetical
protein F59E12.10 protein.
Length = 189
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 400 RAESCSCAVCSRTDRPTRPMTSTCRSYDRS 489
++E ++ R D P+RP T R+Y+ S
Sbjct: 149 KSEGVDPSILKRGDEPSRPQAQTSRNYESS 178
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 27.5 bits (58), Expect = 9.1
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +1
Query: 382 RC-GGAARAESCSCAVCSRTDRPTRPMTSTCRSYDRSSADSNC*RVEALQARFPRXHAAV 558
RC G + E+C A RP RP T YD RVEAL+ +P
Sbjct: 89 RCLGPNQQTEACDPATSPILGRPPRPNTINPDDYDSVDPWQED-RVEALKQLYPDE---- 143
Query: 559 GIRQKISSSSDIRELRLR 612
I +K+S D + RLR
Sbjct: 144 TIDEKLSHLPDHEKERLR 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,902,555
Number of Sequences: 27780
Number of extensions: 275622
Number of successful extensions: 966
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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