Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0303.Seq
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    28   0.091
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -3

Query: 356 WEDHLRFNPYCIHGNIGFSECCFID--CHFDLFTTRNSNSD 240
           WEDHL    + + G + F    F+     FDLF  +   ++
Sbjct: 309 WEDHLAVKHFSVEGQLEFRALLFVPRRVPFDLFENKKRKNN 349


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 334 LNLKWSSQQNAGRELLH 384
           LN  WSSQ +   EL+H
Sbjct: 331 LNFDWSSQVSKAGELIH 347


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 601 QQHTG*TLMALYYKISTPFISMFIF 527
           ++H    +  +Y + STP++ ++IF
Sbjct: 48  KEHIFERIRTIYNQFSTPYVGIYIF 72


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = +1

Query: 562 CNKGP*ASSPYVVGYTKELPCGHQAVRMGRCEGNLFSDYGSLSNVASPSD 711
           CN  P  + P      +   C     R+ RC   L  D  SL  V  P++
Sbjct: 156 CNDDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLRCVVPPTE 205


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 255 PSGEKVKVTIDEAAFAKPNVPM 320
           P+G+ V   IDE ++  P  P+
Sbjct: 519 PNGDHVISLIDEISYMAPPAPL 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,921
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)