Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0302.Seq
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p pro...   111   1e-24
AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA...   111   1e-24
AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    33   0.41 
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    33   0.41 

>BT001625-1|AAN71380.1|  907|Drosophila melanogaster RE37361p
           protein.
          Length = 907

 Score =  111 bits (266), Expect = 1e-24
 Identities = 63/167 (37%), Positives = 92/167 (55%)
 Frame = +3

Query: 240 IRKS*LTSGTTWHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMFIS 419
           + ++ LT+GTTWHTAG++W LRP D++++LL +SR +   L +E +   GWI NGG+FI+
Sbjct: 78  LERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIA 137

Query: 420 RSTVRTQEYLRLHTLGKAMGIPSEVLDPHERRKSFHCWTHQRSKWLFTQRKTVLSIRRWL 599
            +  R  EY RL T+G A+GI ++VL P + +K F                  +     L
Sbjct: 138 HNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPSAFVGALYSPGDGVMDPAML 197

Query: 600 AVRLFKVAKKNGAKVYEDCSGC*RFIIRTTCFGNKEVTGVHTDRGFI 740
              L K A   GA+V E+C G    ++  T  G K+V GV T  G I
Sbjct: 198 CAALKKAATNLGAQVIENC-GVDDLLLEQTARG-KKVVGVSTPFGDI 242



 Score = 35.5 bits (78), Expect = 0.077
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 193 CNTLYQLSKRGVNAVLLERA 252
           C+TLY L++RGV AVLLERA
Sbjct: 62  CHTLYHLARRGVKAVLLERA 81


>AE013599-2554|AAF57796.1|  894|Drosophila melanogaster CG6385-PA
           protein.
          Length = 894

 Score =  111 bits (266), Expect = 1e-24
 Identities = 63/167 (37%), Positives = 92/167 (55%)
 Frame = +3

Query: 240 IRKS*LTSGTTWHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMFIS 419
           + ++ LT+GTTWHTAG++W LRP D++++LL +SR +   L +E +   GWI NGG+FI+
Sbjct: 65  LERAQLTAGTTWHTAGLLWRLRPNDVDIQLLANSRRMLQQLEEETELDPGWIQNGGIFIA 124

Query: 420 RSTVRTQEYLRLHTLGKAMGIPSEVLDPHERRKSFHCWTHQRSKWLFTQRKTVLSIRRWL 599
            +  R  EY RL T+G A+GI ++VL P + +K F                  +     L
Sbjct: 125 HNETRLDEYRRLATVGSALGIENQVLSPEDTQKLFPLLDPSAFVGALYSPGDGVMDPAML 184

Query: 600 AVRLFKVAKKNGAKVYEDCSGC*RFIIRTTCFGNKEVTGVHTDRGFI 740
              L K A   GA+V E+C G    ++  T  G K+V GV T  G I
Sbjct: 185 CAALKKAATNLGAQVIENC-GVDDLLLEQTARG-KKVVGVSTPFGDI 229



 Score = 35.5 bits (78), Expect = 0.077
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +1

Query: 193 CNTLYQLSKRGVNAVLLERA 252
           C+TLY L++RGV AVLLERA
Sbjct: 49  CHTLYHLARRGVKAVLLERA 68


>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = +3

Query: 273 WHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMFISRSTVRTQEYLR 452
           W   G+     P   E+KL   S  +   LA E     GW   G + ++RS  R   + R
Sbjct: 110 WTACGLAGRFEPSYTELKLAEYSIDLIKRLA-ENGLPTGWRPVGSLNLARSWDRMTAFNR 168

Query: 453 LHTLGKAMGIPSEVLDPHERRKSFHC 530
           + +   A G+  E+L P +  +  HC
Sbjct: 169 MKSQALAWGMHCEILSPEQCAQ--HC 192


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 24/86 (27%), Positives = 37/86 (43%)
 Frame = +3

Query: 273 WHTAGMVWSLRPCDLEVKLLRDSRTVYSALAKEVDDYAGWINNGGMFISRSTVRTQEYLR 452
           W   G+     P   E+KL   S  +   LA E     GW   G + ++RS  R   + R
Sbjct: 110 WTACGLAGRFEPSYTELKLAEYSIDLIKRLA-ENGLPTGWRPVGSLNLARSWDRMTAFNR 168

Query: 453 LHTLGKAMGIPSEVLDPHERRKSFHC 530
           + +   A G+  E+L P +  +  HC
Sbjct: 169 MKSQALAWGMHCEILSPEQCAQ--HC 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,838,791
Number of Sequences: 53049
Number of extensions: 709783
Number of successful extensions: 1454
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)