Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0301.Seq
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 70 2e-12
11_04_0318 + 16336356-16336358,16337254-16337484,16337580-163376... 54 1e-07
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 35 0.071
06_01_0220 - 1673657-1675765 31 0.67
11_04_0299 + 16127671-16128180,16128217-16128516 31 0.88
01_07_0025 + 40565296-40565497,40565591-40566075 31 0.88
03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308 31 1.2
03_05_0216 + 22054471-22054797,22055473-22055787 30 1.5
03_05_0147 - 21268081-21268596 30 1.5
11_06_0110 + 20212221-20214011,20214072-20214368 30 2.0
09_04_0142 + 15039745-15040538,15041094-15041218,15041842-150421... 30 2.0
08_02_1213 - 25329775-25330227 29 3.5
08_01_0893 - 8789491-8791416 29 3.5
07_03_1750 - 29207692-29208225 29 3.5
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 3.5
12_02_0064 + 13104835-13105311,13107731-13108119,13108156-131082... 29 4.7
04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600 29 4.7
04_04_1360 + 32889597-32890343 28 6.2
12_02_0329 + 17585046-17585561 28 8.2
11_04_0212 - 14919074-14919433,14919444-14920514 28 8.2
08_02_0588 + 19036509-19039235 28 8.2
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 8.2
07_01_0119 - 908600-909592,909685-909885 28 8.2
04_03_0521 + 16765347-16767324,16769202-16769392 28 8.2
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P PP+ F++DVS +AV+SGL++ + I + +LP G T++GF+T+ ST+HF+
Sbjct: 428 PMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLP----GFPRTQIGFLTFDSTLHFH 483
Query: 213 NIKGSLGQAQMLSVA 257
N K SL Q QM+ VA
Sbjct: 484 NFKSSLSQPQMMVVA 498
Score = 60.1 bits (139), Expect = 2e-09
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Frame = +2
Query: 170 PR-RLHHLQLDRSLLQH--QGQLRPSPNAVGGDVGDMFVPILEGFLERVEDSGSVLASLL 340
PR ++ L D +L H + L V D+ D+F+P+ + L + DS V+ S L
Sbjct: 467 PRTQIGFLTFDSTLHFHNFKSSLSQPQMMVVADLDDVFLPLPDDLLVNLVDSRHVVDSFL 526
Query: 341 EQIPAMFRENKETETVMLPAVQAGLEALKAADTAGQLFVFHTTLPTYXRAREARQPSGQE 520
+ +P MF++N E+ + PA++A + + G+L VF +TLP+ R +
Sbjct: 527 DSLPNMFQDNVNVESALGPALKAAFMVM--SQIGGKLLVFQSTLPSLGVGRLRLRGDDVR 584
Query: 521 AFGNRPRKSXYWXRRTPRTXXWGAACSVAGVAVQLFACNNAYIXXATWGQLPR 679
A+G S P A + +AV +F+ ++ Y A+ G L +
Sbjct: 585 AYGTDKEHSLR-VPEDPFYKQMAAEFTKNQIAVDIFSFSDKYCDIASLGSLAK 636
>11_04_0318 +
16336356-16336358,16337254-16337484,16337580-16337654,
16337741-16337839,16339010-16339121,16339586-16339713,
16340022-16340141,16340967-16341047,16341460-16341537,
16341616-16341708,16341880-16341934,16342795-16342871,
16343008-16343079,16343159-16343242,16343620-16343739,
16343824-16343892,16344721-16344798,16345684-16345822,
16345990-16346154,16346239-16346384,16346501-16346680,
16346834-16346922,16346997-16347028,16347120-16347226
Length = 810
Score = 54.0 bits (124), Expect = 1e-07
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Frame = +2
Query: 257 DVGDMFVPILEGFLERVEDSGSVLASLLEQIPAMFRENKETETVMLPAVQAGLEALKAAD 436
DV D++ P+ + + V + L LLE IP+MF N+ ++ A++AG A+K+
Sbjct: 291 DVQDVYTPLQKDLILPVSECRENLEQLLESIPSMFENNRVADSAFGAAMKAGFLAMKS-- 348
Query: 437 TAGQLFVFHTTLPTY----XRAREARQPSGQEAFGNRPRKSXYWXRRTPRTXXWGAACSV 604
T G+L VF + LP+ AREA + P K +T +T +
Sbjct: 349 TGGKLLVFQSVLPSLGVGSLSAREAEGRANVSTGDKEPHKLLQPVDKTLKT--MALEFAE 406
Query: 605 AGVAVQLFACNNAYIXXATWGQLP 676
V V +F +Y+ A+ +P
Sbjct: 407 YQVCVDVFLTTQSYVDIASISVVP 430
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFY 212
P P F++DVS NA+++G A C I I +LP+ + T VG T+ S +HFY
Sbjct: 220 PMPAVYFFLIDVSMNAIQTGSTAAACSAISQAISDLPEGPR----TMVGIATFDSAIHFY 275
Query: 213 NIKGSLGQAQMLSV 254
++K + Q ML V
Sbjct: 276 SLKRAQQQPLMLIV 289
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 33 PKPPATVFVLDVSYNAVKSGLVDAFCENILDIIRELPKDEQG 158
P P F++DVS NA+++G A C I + +LP ++G
Sbjct: 502 PMPAVYFFLIDVSMNAIQTGATAAACSAISQALSDLPVMKRG 543
>06_01_0220 - 1673657-1675765
Length = 702
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -1
Query: 221 LDVVEVNGRAVGDEADAGVALPLLVLGQLPDDVEDVLAERVD--EAALDGVVRHVQHEHG 48
+D+ +V +A G + G+ LPL +L + P DVL RV+ AA D VR +G
Sbjct: 88 IDLAKVVAKAAGPRSGGGLGLPLPLLVRFP----DVLRHRVEALNAAFDYAVRST--GYG 141
Query: 47 GR 42
GR
Sbjct: 142 GR 143
>11_04_0299 + 16127671-16128180,16128217-16128516
Length = 269
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -2
Query: 400 GRQHDSLR--LLVLSEHGGNLLQQGGEHRAAVLDPLQEPLQDGHEHVAHV 257
G + DSL+ L V + LL Q +HR ++D LQE L++ EHV+ +
Sbjct: 55 GSEIDSLKAQLQVHGDQFQQLLDQYNDHRE-MMDTLQEQLRESQEHVSQL 103
>01_07_0025 + 40565296-40565497,40565591-40566075
Length = 228
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +1
Query: 274 RAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGS 420
R HP +PGEG G+R LPA + R G G G W S
Sbjct: 60 RLHPWDLPGEGDGERYFFHLPATS----CWRRGGGGSRAGGGGGAWRAS 104
>03_02_0257 + 6907997-6908504,6909316-6909348,6910163-6910308
Length = 228
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +1
Query: 256 RRGRHVRAHPGGVPGEGRGQR-LGARLPA--GADSRHVQREQG-DGDCHAAGRSGW 411
RRGR R GGV G R QR LG+ PA G+ +R G GR GW
Sbjct: 46 RRGRPARRGGGGVAGCPRRQRQLGSGAPAQPGSGGSAARRRAGVVAAAFGRGRGGW 101
>03_05_0216 + 22054471-22054797,22055473-22055787
Length = 213
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 286 GGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAG 399
GG+ G G G R L A +R R+QG G C A G
Sbjct: 35 GGLEGRG-GSRTDVNLAVPAPARCSTRQQGKGGCGAVG 71
>03_05_0147 - 21268081-21268596
Length = 171
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +1
Query: 250 RWRRG-----RHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWS 414
+WRR R +R HP G G R GARL +R G G AG S W
Sbjct: 33 KWRRWGGVGWRWIR-HPHGRIWRGSAARGGARLGVATVARRRNAAGGSGGGPVAGSSTWQ 91
Query: 415 G 417
G
Sbjct: 92 G 92
>11_06_0110 + 20212221-20214011,20214072-20214368
Length = 695
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Frame = +3
Query: 30 LPKPPATVFVLDVSYNAVKSGLVDAFCE----NILDIIRELPKDE------QGKSYTRVG 179
+P+ P + +LD+SYN + + + CE N LD+ L + E + +T++
Sbjct: 544 IPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLLEGEFPQCSLMSRGWTKLS 603
Query: 180 FITYS 194
F+ S
Sbjct: 604 FLDLS 608
>09_04_0142 +
15039745-15040538,15041094-15041218,15041842-15042137,
15042267-15042554,15042834-15043193
Length = 620
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = -2
Query: 475 GQRSVEHEQLTGGVGSFQSFQTSLNGRQHDSLRLLVLSEHGGNLLQQGGEHRAAVLDPLQ 296
G+++++ + +T + + + + G + LLV +H G+ L + A + +
Sbjct: 458 GKKTIKTKDITSALLARDQMRKNKEGETSQAEGLLVKEDHVGHKLGDDTSYPAVGVREVN 517
Query: 295 EPLQDGHEHV 266
L+DG EHV
Sbjct: 518 IKLEDGGEHV 527
>08_02_1213 - 25329775-25330227
Length = 150
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +1
Query: 250 RWRRGRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDC--HAAGRSGWSG 417
RWRRG R GG G GA +GA + ++R G G +G S W G
Sbjct: 41 RWRRGGPGREDNGGGVAHRGGTGGGATQRSGAGGK-MRRRAGSGGAEERISGSSTWEG 97
>08_01_0893 - 8789491-8791416
Length = 641
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 238 PKCCRWRRGRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQRE 369
PK R R +R H +P +G RL AR+P DS+ + E
Sbjct: 553 PKAVLNRAERELRWHIPDIPLKGPAGRLRARMPVDQDSKDGELE 596
>07_03_1750 - 29207692-29208225
Length = 177
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 RWRRGRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAA-GRSGWSGSFE 426
RWR R ++ + R R + P+ A SR V+ AA GRS WS +
Sbjct: 24 RWRTRREQESYSSKLLDALRLVRAASGRPSPASSREVRHAADRALAVAARGRSRWSRAIL 83
Query: 427 SCRHRRSAVR 456
+ R R A+R
Sbjct: 84 ASRARACALR 93
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +1
Query: 235 KPKCCRWRRGRHVRAHPGGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSG 408
KP+ R GR V GG G GR +RL RLP + V + CH R+G
Sbjct: 508 KPQGGGGRHGRAVDLGGGGGGGGGRSKRLELRLPRRSACASVALK--SSGCHHHVRAG 563
>12_02_0064 +
13104835-13105311,13107731-13108119,13108156-13108286,
13108378-13108469,13108488-13109264,13109291-13109320
Length = 631
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +1
Query: 295 PGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWS 414
PG R GAR+ A A S +R G G+C GR G S
Sbjct: 95 PGPWRFGGWGARMAAAAGSETEERSHGGGEC---GRDGVS 131
>04_01_0453 + 5869627-5870232,5870383-5870897,5870964-5871600
Length = 585
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 286 GGVPGEGRGQRLGARLPAGADSRHVQREQGDGDCHAAGRSGWSGSF 423
GG PG GRG+ G P G + G + G GWS F
Sbjct: 35 GGAPG-GRGRGRGRGRPTGRPGPRHEFSHAGGWNNFGGGHGWSSGF 79
>04_04_1360 + 32889597-32890343
Length = 248
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 331 LPAGADSRHVQREQGDGDCHAAGRSGWSGS 420
+PA AD+ H GD D G GW+ S
Sbjct: 153 MPAMADTLHGLWRDGDSDSDGGGTVGWAAS 182
>12_02_0329 + 17585046-17585561
Length = 171
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 250 RWRRGRHVRAHPGGVPGEG 306
RWRRG+ R GV GEG
Sbjct: 148 RWRRGKERRREQSGVGGEG 166
>11_04_0212 - 14919074-14919433,14919444-14920514
Length = 476
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 256 RRGRHVRAHPGGVPGEGRGQR 318
RRG AH GV GEG G+R
Sbjct: 332 RRGGAEEAHAAGVGGEGEGER 352
>08_02_0588 + 19036509-19039235
Length = 908
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 676 RQLPPGCGXDVGVVAGEQ 623
RQLPPGCG D + G +
Sbjct: 334 RQLPPGCGRDAALPLGRR 351
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 27.9 bits (59), Expect = 8.2
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 155 REELHPRRLHHLQLDRSLLQHQGQLRPSP--NAVGGDVGDMFVPIL--EGFLERVEDSGS 322
R +PR+L L ++ S L+ L+PSP + G + + FV L + R+ +S
Sbjct: 36 RGRSNPRQLQALMVNASSLKVLQHLQPSPFSEKLVGILREEFVKTLFVRRDIRRLRESLK 95
Query: 323 VLASLLEQIPAMFRENKETET 385
S+ E A+ EN+ T T
Sbjct: 96 YFDSVREDADALALENRVTGT 116
>07_01_0119 - 908600-909592,909685-909885
Length = 397
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -2
Query: 367 LSEHGGNLLQQGGEHRAAVLDPLQEPLQDGHEHVAHVATDSIWAWPKL 224
L H N+ ++GG A EPL+ G H + D +W +L
Sbjct: 322 LFRHAHNVARRGGARVVATEVGACEPLRAGVPHWPRLGADDLWCIKRL 369
>04_03_0521 + 16765347-16767324,16769202-16769392
Length = 722
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 93 LVDAFCENILDIIRELPKDEQGKSYTRVGFITYSSTVHFYNIKG 224
++D C++ E ++ ++ TR ITY+S +H Y+I G
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISG 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,455,243
Number of Sequences: 37544
Number of extensions: 381275
Number of successful extensions: 1783
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -