Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0300.Seq
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +3

Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
           CRR C      C  R    CR  CCGC
Sbjct: 97  CRRCCTCCRTCCCTRCCTCCRPCCCGC 123


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +3

Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
           CRR C      C  R    CR  CCGC
Sbjct: 95  CRRCCTCCRTCCCTRCCTCCRPCCCGC 121


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +3

Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
           CRR C      C  R    CR  CCGC
Sbjct: 96  CRRCCTCCRTCCCTRCCTCCRPCCCGC 122


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +3

Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
           CRR C      C  R    CR  CCGC
Sbjct: 96  CRRCCTCCRTCCCTRCCTCCRPCCCGC 122


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
 Frame = +3

Query: 291 CRRGCRTTAGSCYGRTAASCR--CCGC 365
           CRR C      C  R    CR  CCGC
Sbjct: 97  CRRCCTCCRTCCCTRCCTCCRPCCCGC 123


>Z81503-1|CAB04111.1|  305|Caenorhabditis elegans Hypothetical
           protein F14F7.1 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 431 QREGGANGGDGNCSNCQKGRP 369
           Q +GG  GG G CS C +  P
Sbjct: 88  QPQGGGGGGGGQCSTCCRPGP 108


>Z81055-4|CAB02893.1|  824|Caenorhabditis elegans Hypothetical
           protein F01G10.5 protein.
          Length = 824

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +2

Query: 53  TELKQKHG*LTLQVYTVQMALFNQI*KHREKLNDIVLNLN*ICSCNIDVYNLMK 214
           +EL +K   LT+QV  +Q A  N++   R+K  +++  L    + N+D+  L+K
Sbjct: 324 SELNEK---LTMQVKDLQDASENELASFRQKEKELIDELRMATNENVDLEELLK 374


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,549,702
Number of Sequences: 27780
Number of extensions: 146972
Number of successful extensions: 427
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)