Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0299.Seq
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical...    32   0.58 
Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical pr...    31   1.0  
DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated...    31   1.0  
U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucos...    29   4.1  
U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucos...    29   4.1  
DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide glyc...    29   4.1  
DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide glyc...    29   4.1  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    29   4.1  
U61954-6|AAK29811.2|  459|Caenorhabditis elegans Sand endocytosi...    28   7.1  
Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AC024202-12|AAF36031.2|  143|Caenorhabditis elegans Hypothetical
           protein Y71H2B.1 protein.
          Length = 143

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 105 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 218
           LYM   +G+Y+   A KC +Y K+  G+   EA++  I+
Sbjct: 87  LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125


>Z74029-4|CAA98429.2|  522|Caenorhabditis elegans Hypothetical
           protein C45B11.1a protein.
          Length = 522

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -3

Query: 196 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 17
           ++I  P  SFRY+  L   ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 16  S 14
           S
Sbjct: 136 S 136


>DQ523831-1|ABF71876.1|  522|Caenorhabditis elegans P21-activated
           kinase PAK-2 protein.
          Length = 522

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = -3

Query: 196 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 17
           ++I  P  SFRY+  L   ++ SPM ++  S S   S+     V + ++ H+ R     V
Sbjct: 76  TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135

Query: 16  S 14
           S
Sbjct: 136 S 136


>U53332-7|AAM15582.1|  379|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform c protein.
          Length = 379

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -3

Query: 151 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLIL 5
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLL 55


>U53332-6|AAL32225.1|  470|Caenorhabditis elegans Ceramide glucosyl
           transferase protein3, isoform b protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -3

Query: 151 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLIL 5
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLL 55


>DQ178634-1|ABD75713.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -3

Query: 151 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLIL 5
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLL 55


>DQ178633-1|ABD75712.1|  470|Caenorhabditis elegans ceramide
           glycosyl transferase protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -3

Query: 151 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLIL 5
           +A  +S +  +T++ + ++STSS++GA+ A  A A  + + +   S +L
Sbjct: 7   VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLL 55


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
           lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -2

Query: 191 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVISSWCKCGVRSQRTHGEDEG 27
           DN + +  Q FR+ G S +     +  +       ISSW +C  +     GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849


>U61954-6|AAK29811.2|  459|Caenorhabditis elegans Sand endocytosis
           protein familyprotein 1 protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 266 PLSILVGEVHGVPLAVFDQTLHGFLDNLSLL---FLQIFRAFGDSGLVFTNDDTHIQLL 99
           P  + +    G P+ V +    G + +L  L   F+   +++GDS +  T+ D HIQ L
Sbjct: 48  PFQVFILSEFGKPIFVNNDRNEGEIVSLVALICAFVSRCQSWGDSLMTMTSQDNHIQFL 106


>Z22173-2|CAA80126.1|  327|Caenorhabditis elegans Hypothetical
           protein C15H7.4 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 63  ATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGK 227
           AT +P  +  L ++   +V  G  E  +A   +   EKK EV+     + +EN K
Sbjct: 136 ATTSPTIESDLTDKPDTNVYTGSREGYVAPSEKGSNEKKKEVVPNGGDKSVENKK 190


>AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical
           protein F38A1.4 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 197 FLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLCQYVIS 81
           F+  + LLF+ +   F    + F NDD  I+ LC   +S
Sbjct: 13  FISQMCLLFILLVFLFYTDKVCFDNDDKEIKGLCYKFVS 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,031,100
Number of Sequences: 27780
Number of extensions: 384227
Number of successful extensions: 1378
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)