Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0298.Seq
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.9  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.1  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 696 NSPNLVSPSTSPVVRKATPSGFRQPQP 616
           N PN  +PSTS  V++  P    Q +P
Sbjct: 32  NVPNFAAPSTSTAVQR--PQAILQVRP 56


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 82  RHELVPNSCSPGDP 41
           RH + P++C P +P
Sbjct: 641 RHVMAPSTCQPQNP 654


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 545 CLAPDQRPPTDPI 583
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 545 CLAPDQRPPTDPI 583
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,722
Number of Sequences: 336
Number of extensions: 3525
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)