Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0298.Seq
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0498 + 3734498-3734976,3736176-3736800                           32   0.64 
07_03_1570 + 27797315-27797409,27797519-27797551,27798135-277981...    31   1.5  
01_01_0839 - 6540971-6541978,6542076-6542240,6542330-6542419,654...    29   3.4  
07_03_1153 + 24398122-24398747,24399326-24399542,24399741-244002...    29   4.5  
03_02_0915 + 12360079-12360095,12360225-12361353                       29   4.5  
01_03_0256 + 14288885-14288936,14289362-14291335,14291648-142916...    29   4.5  
07_03_0849 + 21997758-21998423                                         28   7.9  
01_06_0725 + 31508156-31508277,31508950-31509118,31509311-315094...    28   7.9  

>07_01_0498 + 3734498-3734976,3736176-3736800
          Length = 367

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 494 DVCSVSDNGVIGRIAQVIVDALPFLAVGGLARKV 393
           D    +D+GV+  IA  +VD   FLA GG+ R V
Sbjct: 26  DEAPAADDGVVEEIAIPVVDLAAFLASGGIGRDV 59


>07_03_1570 +
           27797315-27797409,27797519-27797551,27798135-27798199,
           27798406-27798493,27798579-27798651,27798975-27799081,
           27799595-27799637,27799760-27799816,27799905-27799981,
           27800221-27800266,27800364-27800410,27800498-27800571,
           27800656-27800711,27800885-27801011,27801133-27801206
          Length = 353

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 548 DSRRRCTMNTGHCH-SYIDDVCSVSDN 471
           D+R R   NT HCH  YI D+  VSD+
Sbjct: 121 DTRERSCCNTFHCHEDYISDMTYVSDS 147


>01_01_0839 -
           6540971-6541978,6542076-6542240,6542330-6542419,
           6542536-6542736,6542886-6543098,6543216-6543461
          Length = 640

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = -2

Query: 757 LSFGLVVIDWFNLEDGDHPGELSELGLAVHVARGPEGNAVRVPPAAALVHWQGLRPGRDG 578
           ++F + ++ W  LE G       ELG A+   R      V+  PA  +++ +      D 
Sbjct: 102 MAFTVTMMAWSVLEYGKQMAAAGELGHAMDAVRWGADYFVKAHPAPNVLYGEVGDGDSDH 161

Query: 577 ICWR 566
           +CW+
Sbjct: 162 VCWQ 165


>07_03_1153 +
           24398122-24398747,24399326-24399542,24399741-24400220,
           24400801-24401007,24401112-24401249,24401317-24401538
          Length = 629

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +2

Query: 551 APDQRPPTD--PITPRPETLPMNQGCGWRNPDGVA 649
           A D  P TD  P+ P+P T     G  WRNP   A
Sbjct: 43  AADAAPATDAAPLPPKPSTGSPFYGENWRNPAAAA 77


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 566 PPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETK 685
           PP + I       PM+QG G  + D  A  T  +VD E K
Sbjct: 42  PPAETIVELTTKKPMSQGGGGSSSDSGATSTGAEVDDEEK 81


>01_03_0256 + 14288885-14288936,14289362-14291335,14291648-14291673,
            14291855-14292025,14292560-14292647,14292711-14292802,
            14292920-14293384,14293860-14294633,14294890-14295087,
            14296940-14297374,14297455-14297688,14298042-14298323
          Length = 1596

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 668  VDGETKFGEFPWMVAILKVEPVDDNEP 748
            +DGE    EFP+   +  VE  DD+EP
Sbjct: 1197 LDGEESLAEFPYASFLQTVETSDDSEP 1223


>07_03_0849 + 21997758-21998423
          Length = 221

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/44 (43%), Positives = 21/44 (47%)
 Frame = +1

Query: 319 CSRSRSLVSLIGLHRPWCLASLRTMTFRARPPTAKKGSASTITC 450
           CSRSRSL SL     P   A+ R    R R P    G A+ I C
Sbjct: 106 CSRSRSLSSLSDALSP--PAARRAPERRGRTPRPAAGVAAVIVC 147


>01_06_0725 +
           31508156-31508277,31508950-31509118,31509311-31509406,
           31510037-31510097,31510387-31510451,31511104-31511178,
           31511276-31511351,31512140-31512303,31512398-31512421
          Length = 283

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 562 ETANRSHHAQAGDPA-NEPGLRLAEP*RRCLP 654
           E   RSHH    D   N+PG+R  +  RRC P
Sbjct: 53  EEDTRSHHEALLDRTKNKPGIRAVDVRRRCCP 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,634,062
Number of Sequences: 37544
Number of extensions: 479983
Number of successful extensions: 1585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)