Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0298.Seq
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY376088-1|AAQ87980.1| 125|Homo sapiens immunoglobulin E heavy ... 32 2.9
AY376073-1|AAQ87965.1| 125|Homo sapiens immunoglobulin E heavy ... 32 2.9
X57548-1|CAA40773.1| 748|Homo sapiens N-cadherin protein. 31 5.1
S42303-1|AAB22854.1| 905|Homo sapiens N-cadherin protein. 31 5.1
M34064-1|AAA03236.1| 747|Homo sapiens NCAD protein. 31 5.1
BC036470-1|AAH36470.1| 906|Homo sapiens cadherin 2, type 1, N-c... 31 5.1
D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein. 31 6.8
BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein do... 31 6.8
BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open readi... 31 6.8
BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open readi... 31 6.8
BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open readi... 31 6.8
AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein. 31 6.8
AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein. 31 6.8
AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein. 31 6.8
AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein. 31 6.8
AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein do... 31 6.8
AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein do... 31 6.8
AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein do... 31 6.8
AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein do... 31 6.8
AK024253-1|BAB14859.1| 533|Homo sapiens protein. 31 6.8
AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein. 30 8.9
>AY376088-1|AAQ87980.1| 125|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 125
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 276 RLQIPGVLFCAHADARKPMNRSLYIFGYYSQNITLTISN 160
R + V +CA A +P N + Y F Y+ Q +T+S+
Sbjct: 87 RAEDTAVYYCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125
>AY376073-1|AAQ87965.1| 125|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 125
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 276 RLQIPGVLFCAHADARKPMNRSLYIFGYYSQNITLTISN 160
R + V +CA A +P N + Y F Y+ Q +T+S+
Sbjct: 87 RAEDTAVYYCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125
>X57548-1|CAA40773.1| 748|Homo sapiens N-cadherin protein.
Length = 748
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 665 DVDGETKFGEFPWMVAILKVEPVDDNEPEXQKLTFY 772
D++G +G A++ V V+DN PE +TFY
Sbjct: 194 DMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFY 229
>S42303-1|AAB22854.1| 905|Homo sapiens N-cadherin protein.
Length = 905
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 665 DVDGETKFGEFPWMVAILKVEPVDDNEPEXQKLTFY 772
D++G +G A++ V V+DN PE +TFY
Sbjct: 352 DMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFY 387
>M34064-1|AAA03236.1| 747|Homo sapiens NCAD protein.
Length = 747
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 665 DVDGETKFGEFPWMVAILKVEPVDDNEPEXQKLTFY 772
D++G +G A++ V V+DN PE +TFY
Sbjct: 194 DMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFY 229
>BC036470-1|AAH36470.1| 906|Homo sapiens cadherin 2, type 1,
N-cadherin (neuronal) protein.
Length = 906
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 665 DVDGETKFGEFPWMVAILKVEPVDDNEPEXQKLTFY 772
D++G +G A++ V V+DN PE +TFY
Sbjct: 353 DMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFY 388
>D86971-1|BAA13207.2| 751|Homo sapiens KIAA0217 protein.
Length = 751
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 662 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 693
>BC131630-1|AAI31631.1| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 368
>AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 336 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 368
>AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 625 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 657
>AL359878-4|CAI13663.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL359878-1|CAI13660.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AL157709-4|CAI39596.2| 738|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 738
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 649 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 680
>AL157709-3|CAI39595.1| 338|Homo sapiens La ribonucleoprotein
domain family, member 5 protein.
Length = 338
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 527 SYIDVCCLAPDQRPPTDPITPRPETLPMNQGCG 625
SY ++C + PP+ P+ P+ E P GCG
Sbjct: 249 SYAEIC-QRTSKEPPSSPLQPQKEQKPNTVGCG 280
>AK024253-1|BAB14859.1| 533|Homo sapiens protein.
Length = 533
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 673 VHVARGPEGNAVRVPPAAALVHWQGLRPGRDGI 575
+ + +GP N V VP A V +G++PG I
Sbjct: 303 IRILQGPHANPVAVPQPGASVQTKGIKPGMPSI 335
>AC005764-1|AAC62428.1| 420|Homo sapiens R31343_1 protein.
Length = 420
Score = 30.3 bits (65), Expect = 8.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 573 QIPSRPGRRPCQ*TRXXXXXXXXXXPSGPRATWTAR 680
Q+PSRPG RP R P GP +T TA+
Sbjct: 23 QLPSRPGHRPPGRPRRCPKASCLPPPVGPSSTQTAK 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,169,881
Number of Sequences: 237096
Number of extensions: 2499703
Number of successful extensions: 11835
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11812
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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