BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0298.Seq
(830 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003168-1|AAO24923.1| 406|Drosophila melanogaster SD23103p pro... 75 9e-14
AE014134-1828|AAF52904.1| 406|Drosophila melanogaster CG5390-PA... 75 9e-14
BT022896-1|AAY55312.1| 421|Drosophila melanogaster IP12536p pro... 54 3e-07
AY061167-1|AAL28715.1| 421|Drosophila melanogaster LD13269p pro... 54 3e-07
AY128488-1|AAM75081.1| 522|Drosophila melanogaster RH01162p pro... 51 2e-06
AE013599-695|AAF59058.1| 459|Drosophila melanogaster CG8738-PA ... 51 2e-06
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 48 2e-05
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 48 2e-05
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 48 2e-05
AY119491-1|AAM50145.1| 355|Drosophila melanogaster GH08193p pro... 46 8e-05
AE014134-2331|AAF53286.1| 355|Drosophila melanogaster CG9377-PA... 46 8e-05
AY089694-1|AAL90432.1| 322|Drosophila melanogaster RH69794p pro... 33 0.48
AE014296-758|AAF47836.2| 322|Drosophila melanogaster CG14990-PA... 33 0.48
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 33 0.48
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 33 0.48
AE014134-2623|AAN10906.1| 294|Drosophila melanogaster CG31827-P... 33 0.48
AE014134-2620|AAG22434.1| 294|Drosophila melanogaster CG18478-P... 33 0.48
BT023143-1|AAY55559.1| 342|Drosophila melanogaster IP10841p pro... 32 0.84
BT023079-1|AAY55495.1| 342|Drosophila melanogaster IP10941p pro... 32 0.84
AE014134-489|AAF51195.1| 343|Drosophila melanogaster CG18557-PA... 32 0.84
BT016058-1|AAV36943.1| 464|Drosophila melanogaster LP15124p pro... 31 1.9
AY118726-1|AAM50586.1| 448|Drosophila melanogaster GH02222p pro... 31 1.9
AE014134-2622|AAN10903.1| 464|Drosophila melanogaster CG31780-P... 31 1.9
AE014134-2619|AAG22433.1| 464|Drosophila melanogaster CG18477-P... 31 1.9
AE013599-694|AAF59059.1| 444|Drosophila melanogaster CG8586-PA ... 31 1.9
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 29 5.9
AY094885-1|AAM11238.1| 376|Drosophila melanogaster RE52283p pro... 29 7.8
AE014297-3353|AAG22168.2| 296|Drosophila melanogaster CG18754-P... 29 7.8
AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB... 29 7.8
AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC... 29 7.8
AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA... 29 7.8
>BT003168-1|AAO24923.1| 406|Drosophila melanogaster SD23103p
protein.
Length = 406
Score = 75.4 bits (177), Expect = 9e-14
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFP 700
C +Y+D+CC P++R DPI P +GCG++NP+GV F+ TG V+ E +FGEFP
Sbjct: 106 CKNYLDLCCDLPNKRK--DPIFEFKPDHP--EGCGYQNPNGVGFKITGAVNQEAEFGEFP 161
Query: 701 WMVAILKVE 727
WM+AIL+ E
Sbjct: 162 WMLAILREE 170
Score = 36.3 bits (80), Expect = 0.051
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 324 PVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVNYYLCNAANNTIITDGTNVIDI 503
PV P + + + G S+ SC G + ECV +LC AN+TI T G +IDI
Sbjct: 45 PVVNPKDSSGSTGSQNGGSSSTQYQSC----GDQKECVPRWLC--ANDTINTSGDGIIDI 98
Query: 504 RV 509
R+
Sbjct: 99 RL 100
>AE014134-1828|AAF52904.1| 406|Drosophila melanogaster CG5390-PA
protein.
Length = 406
Score = 75.4 bits (177), Expect = 9e-14
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFP 700
C +Y+D+CC P++R DPI P +GCG++NP+GV F+ TG V+ E +FGEFP
Sbjct: 106 CKNYLDLCCDLPNKRK--DPIFEFKPDHP--EGCGYQNPNGVGFKITGAVNQEAEFGEFP 161
Query: 701 WMVAILKVE 727
WM+AIL+ E
Sbjct: 162 WMLAILREE 170
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +3
Query: 324 PVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVNYYLCNAANNTIITDGTNVIDI 503
PV P + + + G S+ SC G + ECV +LC AN+TI T G +IDI
Sbjct: 45 PVVNPKDSSGSTGSENGGSSSTQYQSC----GDQKECVPRWLC--ANDTINTSGDGIIDI 98
Query: 504 RV 509
R+
Sbjct: 99 RL 100
>BT022896-1|AAY55312.1| 421|Drosophila melanogaster IP12536p
protein.
Length = 421
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFP 700
C + +DVCC A T TP + +GCG RN G+ F +G E FGEFP
Sbjct: 118 CPASVDVCCDANRTLNKTLNPTPLDQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFP 177
Query: 701 WMVAIL 718
W VA+L
Sbjct: 178 WTVALL 183
>AY061167-1|AAL28715.1| 421|Drosophila melanogaster LD13269p
protein.
Length = 421
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFP 700
C + +DVCC A T TP + +GCG RN G+ F +G E FGEFP
Sbjct: 118 CPASVDVCCDANRTLNKTLNPTPLDQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFP 177
Query: 701 WMVAIL 718
W VA+L
Sbjct: 178 WTVALL 183
>AY128488-1|AAM75081.1| 522|Drosophila melanogaster RH01162p
protein.
Length = 522
Score = 50.8 bits (116), Expect = 2e-06
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 533 IDVCCLAPDQ-RPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMV 709
++ CC DQ +PI + + +GCG+ NP G+ ++ G +GE+ F EFPWMV
Sbjct: 222 VEECCPLGDQIEEGRNPIQRNVKDFLL-KGCGYSNPKGLYYQLDGYNNGESVFAEFPWMV 280
Query: 710 AILKVE 727
A++ +E
Sbjct: 281 ALMDME 286
>AE013599-695|AAF59058.1| 459|Drosophila melanogaster CG8738-PA
protein.
Length = 459
Score = 50.8 bits (116), Expect = 2e-06
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +2
Query: 533 IDVCCLAPDQ-RPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMV 709
++ CC DQ +PI + + +GCG+ NP G+ ++ G +GE+ F EFPWMV
Sbjct: 159 VEECCPLGDQIEEGRNPIQRNVKDFLL-KGCGYSNPKGLYYQLDGYNNGESVFAEFPWMV 217
Query: 710 AILKVE 727
A++ +E
Sbjct: 218 ALMDME 223
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +2
Query: 590 RPETLPMNQG-CGWRNPDGVAFRTTGDV--DGETKFGEFPWMVAILKVEP 730
RP+ P G CG RN G+ R V DG+++FGE+PW VAILK +P
Sbjct: 616 RPQAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGEYPWHVAILKKDP 665
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +2
Query: 590 RPETLPMNQG-CGWRNPDGVAFRTTGDV--DGETKFGEFPWMVAILKVEP 730
RP+ P G CG RN G+ R V DG+++FGE+PW VAILK +P
Sbjct: 616 RPQAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGEYPWHVAILKKDP 665
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 48.0 bits (109), Expect = 2e-05
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Frame = +2
Query: 590 RPETLPMNQG-CGWRNPDGVAFRTTGDV--DGETKFGEFPWMVAILKVEP 730
RP+ P G CG RN G+ R V DG+++FGE+PW VAILK +P
Sbjct: 910 RPQAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGEYPWHVAILKKDP 959
>AY119491-1|AAM50145.1| 355|Drosophila melanogaster GH08193p
protein.
Length = 355
Score = 45.6 bits (103), Expect = 8e-05
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 530 YIDVCCLAPDQRPPTDPITPR-PETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWM 706
Y++ CC PD+ P TP+ PE + M+ CG R+ R G E KFGEFPW+
Sbjct: 62 YMEKCCNIPDKLP-----TPKIPEEM-MSCPCGGRHDLWYYLRPLGYKQQEAKFGEFPWL 115
Query: 707 VAI 715
VA+
Sbjct: 116 VAV 118
>AE014134-2331|AAF53286.1| 355|Drosophila melanogaster CG9377-PA
protein.
Length = 355
Score = 45.6 bits (103), Expect = 8e-05
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 530 YIDVCCLAPDQRPPTDPITPR-PETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWM 706
Y++ CC PD+ P TP+ PE + M+ CG R+ R G E KFGEFPW+
Sbjct: 62 YMEKCCNIPDKLP-----TPKIPEEM-MSCPCGGRHDLWYYLRPLGYKQQEAKFGEFPWL 115
Query: 707 VAI 715
VA+
Sbjct: 116 VAV 118
>AY089694-1|AAL90432.1| 322|Drosophila melanogaster RH69794p
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.48
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 611 NQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAI 715
NQ CG NP+G+ D T G+FPW+VA+
Sbjct: 45 NQVCGMSNPNGLVANVKVPKDYSTP-GQFPWVVAL 78
>AE014296-758|AAF47836.2| 322|Drosophila melanogaster CG14990-PA
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.48
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 611 NQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAI 715
NQ CG NP+G+ D T G+FPW+VA+
Sbjct: 45 NQVCGMSNPNGLVANVKVPKDYSTP-GQFPWVVAL 78
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 33.1 bits (72), Expect = 0.48
Identities = 26/71 (36%), Positives = 31/71 (43%)
Frame = +2
Query: 506 SGSGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETK 685
+G+ C S CC P P+ + LP CG N GV F T D K
Sbjct: 53 NGNQGCESG-QTCC--PKTEILQYPVQADNQPLPTE--CGHVNRIGVGFTITNARDIAQK 107
Query: 686 FGEFPWMVAIL 718
GE PWMVA+L
Sbjct: 108 -GELPWMVALL 117
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 33.1 bits (72), Expect = 0.48
Identities = 26/71 (36%), Positives = 31/71 (43%)
Frame = +2
Query: 506 SGSGPCSSYIDVCCLAPDQRPPTDPITPRPETLPMNQGCGWRNPDGVAFRTTGDVDGETK 685
+G+ C S CC P P+ + LP CG N GV F T D K
Sbjct: 53 NGNQGCESG-QTCC--PKTEILQYPVQADNQPLPTE--CGHVNRIGVGFTITNARDIAQK 107
Query: 686 FGEFPWMVAIL 718
GE PWMVA+L
Sbjct: 108 -GELPWMVALL 117
>AE014134-2623|AAN10906.1| 294|Drosophila melanogaster CG31827-PA
protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.48
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 620 CGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
CG+ NPD V + +G+ K EFPW +A++
Sbjct: 31 CGYGNPDAVKVQFNV-TEGQAKPAEFPWTIAVI 62
>AE014134-2620|AAG22434.1| 294|Drosophila melanogaster CG18478-PA
protein.
Length = 294
Score = 33.1 bits (72), Expect = 0.48
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 620 CGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
CG+ NPD V + +G+ K EFPW +A++
Sbjct: 31 CGYGNPDAVKVQFNV-TEGQAKPAEFPWTIAVI 62
>BT023143-1|AAY55559.1| 342|Drosophila melanogaster IP10841p
protein.
Length = 342
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 605 PMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILK 721
P+N CG NP+G+ T +V + K EFPW VA+++
Sbjct: 67 PLN--CGKSNPNGLG-GTVEEVVDQAKPNEFPWTVALMQ 102
>BT023079-1|AAY55495.1| 342|Drosophila melanogaster IP10941p
protein.
Length = 342
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 605 PMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILK 721
P+N CG NP+G+ T +V + K EFPW VA+++
Sbjct: 67 PLN--CGKSNPNGLG-GTVEEVVDQAKPNEFPWTVALMQ 102
>AE014134-489|AAF51195.1| 343|Drosophila melanogaster CG18557-PA
protein.
Length = 343
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 605 PMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAILK 721
P+N CG NP+G+ T +V + K EFPW VA+++
Sbjct: 68 PLN--CGKSNPNGLG-GTVEEVVDQAKPNEFPWTVALMQ 103
>BT016058-1|AAV36943.1| 464|Drosophila melanogaster LP15124p
protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 620 CGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
CG+ N GV F + G + E PWMVA+L
Sbjct: 93 CGFVNSKGVTFSFREEDTGLAQEAEVPWMVALL 125
>AY118726-1|AAM50586.1| 448|Drosophila melanogaster GH02222p
protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQR--PPTDPITPRPETLPMNQGCGWRNPDGVA-----FRTTGDVDGE 679
CS + CC A DQ+ P + + CG+ NP G+ F + DV
Sbjct: 139 CSKSLYRCC-AVDQKVDDSESPYLVKQANFKY-KNCGYSNPKGLIPDNDKFPYSEDV--- 193
Query: 680 TKFGEFPWMVAI 715
+ FGEFPWMV I
Sbjct: 194 SIFGEFPWMVGI 205
>AE014134-2622|AAN10903.1| 464|Drosophila melanogaster CG31780-PB
protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 620 CGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
CG+ N GV F + G + E PWMVA+L
Sbjct: 93 CGFVNSKGVTFSFREEDTGLAQEAEVPWMVALL 125
>AE014134-2619|AAG22433.1| 464|Drosophila melanogaster CG18477-PA
protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 620 CGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
CG+ N GV F + G + E PWMVA+L
Sbjct: 93 CGFVNSKGVTFSFREEDTGLAQEAEVPWMVALL 125
>AE013599-694|AAF59059.1| 444|Drosophila melanogaster CG8586-PA
protein.
Length = 444
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = +2
Query: 521 CSSYIDVCCLAPDQR--PPTDPITPRPETLPMNQGCGWRNPDGVA-----FRTTGDVDGE 679
CS + CC A DQ+ P + + CG+ NP G+ F + DV
Sbjct: 139 CSKSLYRCC-AVDQKVDDSESPYLVKQANFKY-KNCGYSNPKGLIPDNDKFPYSEDV--- 193
Query: 680 TKFGEFPWMVAI 715
+ FGEFPWMV I
Sbjct: 194 SIFGEFPWMVGI 205
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 354 APSTLVPGVSTNDDLSCQTSDGQEGECV-NYYLCNA 458
AP T PG TNDDL C + + ++ LCN+
Sbjct: 381 APLTKTPGKRTNDDLDCSNFKTPNKKIMRDFQLCNS 416
>AY094885-1|AAM11238.1| 376|Drosophila melanogaster RE52283p
protein.
Length = 376
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 409 PPTAKKGSASTITCAMRPITPLSLTE 486
PPT GS ST+ M P+TPL+ E
Sbjct: 205 PPTDAHGSQSTLPSMMGPLTPLTPIE 230
>AE014297-3353|AAG22168.2| 296|Drosophila melanogaster CG18754-PA
protein.
Length = 296
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 596 ETLPMNQGCGWRNPDGVAFRTTGDVDGETKFGEFPWMVAIL 718
+ LP Q CG P FR G + E E+PWMV +L
Sbjct: 44 DVLPNKQTCGQTTP---VFRDRGAENAE--LNEYPWMVLLL 79
>AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB,
isoform B protein.
Length = 1091
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 409 PPTAKKGSASTITCAMRPITPLSLTE 486
PPT GS ST+ M P+TPL+ E
Sbjct: 224 PPTDAHGSQSTLPSMMGPLTPLTPIE 249
>AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC,
isoform C protein.
Length = 923
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 409 PPTAKKGSASTITCAMRPITPLSLTE 486
PPT GS ST+ M P+TPL+ E
Sbjct: 205 PPTDAHGSQSTLPSMMGPLTPLTPIE 230
>AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA,
isoform A protein.
Length = 1072
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 409 PPTAKKGSASTITCAMRPITPLSLTE 486
PPT GS ST+ M P+TPL+ E
Sbjct: 205 PPTDAHGSQSTLPSMMGPLTPLTPIE 230
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,094,613
Number of Sequences: 53049
Number of extensions: 749937
Number of successful extensions: 2776
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2761
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -