Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0297.Seq
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    40   0.006
X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral n...    33   0.48 
AL031883-2|CAA21410.1|  723|Drosophila melanogaster EG:118B3.1,F...    33   0.48 
AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA, ...    33   0.48 
AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.    29   7.8  
AY113408-1|AAM29413.1|  133|Drosophila melanogaster RE13473p pro...    29   7.8  
AE014296-3696|AAF51845.1|  133|Drosophila melanogaster CG14453-P...    29   7.8  
AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-P...    29   7.8  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 22 AAALELVDPPGCRNSAR 72
          AAALELVDPPGCRNSAR
Sbjct: 7  AAALELVDPPGCRNSAR 23


>X87141-1|CAA60619.1|  722|Drosophila melanogaster VND (ventral
           nervous system defective)protein.
          Length = 722

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 155 SLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQDELH 313
           SL    +S+ T++ SSP T  R  R S  +  RKR      ++ D K++ E H
Sbjct: 31  SLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERH 83


>AL031883-2|CAA21410.1|  723|Drosophila melanogaster
           EG:118B3.1,FBgn0003986;vnd protein.
          Length = 723

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 155 SLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQDELH 313
           SL    +S+ T++ SSP T  R  R S  +  RKR      ++ D K++ E H
Sbjct: 31  SLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERH 83


>AE014298-61|AAF45521.1|  723|Drosophila melanogaster CG6172-PA,
           isoform A protein.
          Length = 723

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 155 SLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQDELH 313
           SL    +S+ T++ SSP T  R  R S  +  RKR      ++ D K++ E H
Sbjct: 31  SLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERH 83


>AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.
          Length = 748

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +2

Query: 146 IPTSLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQDELHGVRL 325
           +P + T    ++ T+A++SP T  R   A++ ++R+ R   K + +   +QQ +L  +  
Sbjct: 293 MPATPTAAPAATPTVAATSPATATRSTTAAMSSKRKGR-RRKAKVRPKAQQQQQLQLLAT 351

Query: 326 STLAP 340
           +  +P
Sbjct: 352 AATSP 356


>AY113408-1|AAM29413.1|  133|Drosophila melanogaster RE13473p
           protein.
          Length = 133

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 146 IPTSLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQ 301
           + +S TT   SS + +SSS     R +RA+   RR  R   + R+Q   +QQ
Sbjct: 63  VASSATTTTTSSSSSSSSSSSAAARRRRAAARRRRLARQRRR-RQQRQRRQQ 113


>AE014296-3696|AAF51845.1|  133|Drosophila melanogaster CG14453-PA
           protein.
          Length = 133

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 146 IPTSLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQ 301
           + +S TT   SS + +SSS     R +RA+   RR  R   + R+Q   +QQ
Sbjct: 63  VASSATTTTTSSSSSSSSSSSAAARRRRAAARRRRLARQRRR-RQQRQRRQQ 113


>AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-PA
           protein.
          Length = 748

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +2

Query: 146 IPTSLTTFWRSSFTIASSSPITTVRLKRASIYTRRRKRSHHKCREQTDTKQQDELHGVRL 325
           +P + T    ++ T+A++SP T  R   A++ ++R+ R   K + +   +QQ +L  +  
Sbjct: 293 MPATPTAAPAATPTVAATSPATATRSTTAAMSSKRKGR-RRKAKVRPKAQQQQQLQLLAT 351

Query: 326 STLAP 340
           +  +P
Sbjct: 352 AATSP 356


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,160,855
Number of Sequences: 53049
Number of extensions: 685491
Number of successful extensions: 2353
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2350
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)