Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0295.Seq
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    24   1.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   9.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.0  

>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 382 YSNP*HTTFPCNMHV*AGDVDSASG 456
           Y  P HT    N H+   D  SASG
Sbjct: 65  YGLPGHTIIASNHHLAKSDTSSASG 89


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 592 EETKSGGYSEITLVMFLVVAAFGGIALLIWKVVP 693
           + +K   +S   +V F       GIALLI+ ++P
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIALLIFYILP 190


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 592 EETKSGGYSEITLVMFLVVAAFGGIALLIWKVVP 693
           + +K   +S   +V F       GIALLI+ ++P
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIALLIFYILP 190


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 592 EETKSGGYSEITLVMFLVVAAFGGIALLIWKVVP 693
           + +K   +S   +V F       GIALLI+ ++P
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIALLIFYILP 190


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 592 EETKSGGYSEITLVMFLVVAAFGGIALLIWKVVP 693
           + +K   +S   +V F       GIALLI+ ++P
Sbjct: 157 KSSKKPAFSHFLIVFFTETLHTVGIALLIFYILP 190


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/45 (22%), Positives = 24/45 (53%)
 Frame = -1

Query: 525 HIACVIELKLFRTSPGLDLGKLMPARTVNVSGLYVHITRKRRVLW 391
           H  C   L   +++  L++ +  P R++ ++ +  + TR+  V+W
Sbjct: 311 HFYCAFSLYPLKSTFYLNVVRPFPERSMGITPMIWNSTRRLFVVW 355


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 201 VPSTLATSLAWGKHWIARAENP 136
           +PS L   ++W   W+ R   P
Sbjct: 76  IPSGLIVIISWVSFWLNRNATP 97


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 725 QYPLYLLTSIFNRRKQRQIFRPRFYLLNHVIR 820
           ++ LY L   +   K   +F PR+YL   V R
Sbjct: 215 EFLLYRLLRCWLISKCIYVFNPRYYLEKKVTR 246


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 725 QYPLYLLTSIFNRRKQRQIFRPRFYLLNHVIR 820
           ++ LY L   +   K   +F PR+YL   V R
Sbjct: 215 EFLLYRLLRCWLISKCIYVFNPRYYLEKKVTR 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,174
Number of Sequences: 336
Number of extensions: 4127
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)