Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0295.Seq
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1164 + 9263990-9264409,9264498-9264603,9264825-9264877,926...    32   0.64 
04_04_1344 + 32787574-32787632,32788488-32789070,32789211-327894...    29   3.4  
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547...    29   4.5  
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940...    29   4.5  
07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049     29   5.9  
11_02_0133 + 8661030-8661141,8661727-8662031,8662158-8662331,866...    28   7.8  
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191...    28   7.8  

>01_01_1164 +
           9263990-9264409,9264498-9264603,9264825-9264877,
           9265249-9265380,9266250-9266372
          Length = 277

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = +3

Query: 42  PPGCRNSARGETHATSPTRSRLDRKSSLCPQEDFQPELSSAYPTRAKWQVSTGPYFGGRI 221
           P   R  AR +  A + TR       SL P +D +   ++A  +   W +   P  GG I
Sbjct: 72  PSRARARARAKLLADADTRDPWLASLSLLPVDDGEAAAAAAAASTG-WAIGVDPDTGGAI 130

Query: 222 AVEAADGGPE 251
           AV + DG  +
Sbjct: 131 AVLSPDGSSQ 140


>04_04_1344 +
           32787574-32787632,32788488-32789070,32789211-32789423,
           32789884-32790173,32791201-32791312,32791394-32791630,
           32791714-32792394
          Length = 724

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 586 IKEETKSGGYSEITLVMFLVVAAFGGIALLIWKVVPQSAKD-NASASTISSLS 741
           ++ ET  GG S     + L   AF G  LL W + P+SA +  AS  T+ +L+
Sbjct: 546 LESETTDGGRSGFFNKVQLKEGAFCGDELLTWALDPKSAANFPASTRTVKALT 598


>09_06_0364 +
           22554082-22554225,22554306-22554520,22554671-22554752,
           22554976-22555371,22555553-22556293,22556420-22556551,
           22556981-22557367
          Length = 698

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 266 LVWSPLWAAVRCLDGYATAKIRSRRHLPLRSRGVST 159
           L+W+  + A  CLD  A A  ++RR    RS G+ST
Sbjct: 177 LLWASTYHAGECLDPVAVADAKARRKAKKRS-GIST 211


>01_06_0737 +
           31592562-31592786,31593314-31593541,31593981-31594054,
           31594595-31594754,31595979-31596098,31596185-31596293,
           31597447-31597628
          Length = 365

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 431 PETLTVRAGINLPKSSPGDVL 493
           PE L VR G+ +P   PGDVL
Sbjct: 41  PEVLEVRQGVPVPDLKPGDVL 61


>07_03_0689 + 20711313-20711906,20713224-20713860,20713946-20714049
          Length = 444

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 93  SARSRASRLVPNSCSPGDPLVLERP 19
           S R +  RL P SC+PG P  L  P
Sbjct: 31  SPRLQGRRLTPPSCTPGTPAALPSP 55


>11_02_0133 +
           8661030-8661141,8661727-8662031,8662158-8662331,
           8662469-8662783,8662886-8663456,8663474-8663786,
           8663870-8663968,8664202-8664315,8664403-8664463,
           8664565-8664657,8664742-8664927
          Length = 780

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 180 SLAWGKHWIARAENPLVGTMMIFDPID 100
           +LA G H+I    +P  GT+++ DP+D
Sbjct: 626 TLALGDHYICLLIHPKDGTVVVLDPLD 652


>02_01_0285 -
           1913425-1914065,1914094-1914177,1914249-1915140,
           1915205-1915249,1915335-1915870,1915987-1916041
          Length = 750

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -3

Query: 292 CVLCAVG-IASYGARSGPPSAASTAMR-PPK*GPVD 191
           C+   VG  +S+G+   PPS A TA+R PP+ G  D
Sbjct: 605 CLSSTVGETSSHGSCQAPPSHAKTALRKPPRCGNGD 640


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,407,264
Number of Sequences: 37544
Number of extensions: 497031
Number of successful extensions: 1452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)