Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0295.Seq
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p pro...    98   1e-20
AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-P...    98   1e-20
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    43   4e-04
AF214523-1|AAF24502.1|  809|Drosophila melanogaster SP460 protein.     34   0.21 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    34   0.21 
AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    30   4.4  
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    30   4.4  

>AY122225-1|AAM52737.1|  561|Drosophila melanogaster RE22905p
           protein.
          Length = 561

 Score = 98.3 bits (234), Expect = 1e-20
 Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
 Frame = +2

Query: 104 IGSKIIIVPTRGFSARAIQCLPHASEVASVDGTLFWXXXXXXXXXXXXXXXXXXXNPNSA 283
           +  + I++PT+GF+A A QCLPHASE+    G  F                    + + A
Sbjct: 237 LAGQSIVIPTKGFTAHATQCLPHASEIEVETGPYF-----GGRIVVDGGNCGIKGDASDA 291

Query: 284 QDAYILRIHHDECGSDVN-ET-TVATYVIVQENLPILTHSTRRFLVICTYKPETLTVRAG 457
            D Y +RI H ECGS V  ET TV T++ VQENL I THSTRRF+V+C+Y     TVRA 
Sbjct: 292 ADKYTMRIDHKECGSLVKPETNTVETFITVQENLGIFTHSTRRFVVVCSYHSGMQTVRAS 351

Query: 458 INLP 469
             +P
Sbjct: 352 FTVP 355


>AE014134-3234|AAF53889.2|  561|Drosophila melanogaster CG16798-PA
           protein.
          Length = 561

 Score = 98.3 bits (234), Expect = 1e-20
 Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
 Frame = +2

Query: 104 IGSKIIIVPTRGFSARAIQCLPHASEVASVDGTLFWXXXXXXXXXXXXXXXXXXXNPNSA 283
           +  + I++PT+GF+A A QCLPHASE+    G  F                    + + A
Sbjct: 237 LAGQSIVIPTKGFTAHATQCLPHASEIEVETGPYF-----GGRIVVDGGNCGIKGDASDA 291

Query: 284 QDAYILRIHHDECGSDVN-ET-TVATYVIVQENLPILTHSTRRFLVICTYKPETLTVRAG 457
            D Y +RI H ECGS V  ET TV T++ VQENL I THSTRRF+V+C+Y     TVRA 
Sbjct: 292 ADKYTMRIDHKECGSLVKPETNTVETFITVQENLGIFTHSTRRFVVVCSYHSGMQTVRAS 351

Query: 458 INLP 469
             +P
Sbjct: 352 FTVP 355


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 20/26 (76%), Positives = 20/26 (76%)
 Frame = +3

Query: 6  STAXRAALELVDPPGCRNSARGETHA 83
          STA  AALELVDPPGCRNSAR    A
Sbjct: 3  STAVAAALELVDPPGCRNSARDRQRA 28


>AF214523-1|AAF24502.1|  809|Drosophila melanogaster SP460 protein.
          Length = 809

 Score = 34.3 bits (75), Expect = 0.21
 Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 296 ILRIHHDECGSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKPETLTVRAGINLPK- 472
           I R+H   CG    +   +  +++Q++  ++T+  + + + C Y+     V  G N+   
Sbjct: 483 IFRVHFGSCGMQAVKDVASFVLVIQKHPKLVTYKAQAYNIKCVYQTGEKNVTLGFNVSML 542

Query: 473 SSPGDVLNS 499
           ++ G + N+
Sbjct: 543 TTAGTIANT 551


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 34.3 bits (75), Expect = 0.21
 Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 296   ILRIHHDECGSDVNETTVATYVIVQENLPILTHSTRRFLVICTYKPETLTVRAGINLPK- 472
             I R+H   CG    +   +  +++Q++  ++T+  + + + C Y+     V  G N+   
Sbjct: 22689 IFRVHFGSCGMQAVKDVASFVLVIQKHPKLVTYKAQAYNIKCVYQTGEKNVTLGFNVSML 22748

Query: 473   SSPGDVLNS 499
             ++ G + N+
Sbjct: 22749 TTAGTIANT 22757


>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 45  PGCRNSARGETHATSPTRSRLDRKSSLCPQE--DFQPELSSAYPTRAKWQVSTGPYFGGR 218
           PG  N+ R  +    P   R+ RK    PQ+  D   EL+   P +++  +  G   G  
Sbjct: 23  PGLSNAVRLSSSQMDPADERVLRKRKFQPQQAADLSEELAGQLPVKSRVVICGGGITGAS 82

Query: 219 IA 224
           +A
Sbjct: 83  VA 84


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 45  PGCRNSARGETHATSPTRSRLDRKSSLCPQE--DFQPELSSAYPTRAKWQVSTGPYFGGR 218
           PG  N+ R  +    P   R+ RK    PQ+  D   EL+   P +++  +  G   G  
Sbjct: 23  PGLSNAVRLSSSQMDPADERVLRKRKFQPQQAADLSEELAGQLPVKSRVVICGGGITGAS 82

Query: 219 IA 224
           +A
Sbjct: 83  VA 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,236,591
Number of Sequences: 53049
Number of extensions: 804399
Number of successful extensions: 2184
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2178
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)