Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0294.Seq
(820 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 23 2.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.9
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 5.1
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 22 5.1
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 22 5.1
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 6.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 6.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 8.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 8.9
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 632 PGMKLLLISVSLVNIMDLRWNALAAIS 712
P L L S ++ +DL WN+++++S
Sbjct: 359 PLTSLSLASAQTLSELDLSWNSISSLS 385
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 626 SPPGMKLLLISVSLVNIMDLRW 691
S P M LLLI S++N+ + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 626 SPPGMKLLLISVSLVNIMDLRW 691
S P M LLLI S++N+ + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 626 SPPGMKLLLISVSLVNIMDLRW 691
S P M LLLI S++N+ + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 626 SPPGMKLLLISVSLVNIMDLRW 691
S P M LLLI S++N+ + W
Sbjct: 1038 SIPSMYLLLILYSIINLNVVSW 1059
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 280 DESGAQLWTLSQGLPSDTSFIRTPVSENAPFGLL 179
D + + + T QG P++T I P S N P LL
Sbjct: 379 DNNVSAVTTQHQGYPTNTVTILGPNSGNTPKILL 412
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Frame = +1
Query: 673 HHGS-PLECIGCNKSIQK 723
H G P CI CNKS +
Sbjct: 16 HSGEKPYRCIDCNKSFSQ 33
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
Frame = +1
Query: 673 HHGS-PLECIGCNKSIQK 723
H G P CI CNKS +
Sbjct: 272 HSGEKPYRCIDCNKSFSQ 289
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 307 LAGLSPSV*DESGAQLWTLSQGLPSDTSFIR 215
LA LSP V + + +S P+DTS +R
Sbjct: 484 LAKLSPKVLEPLYSGNLAVSVATPNDTSLVR 514
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 6.7
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +2
Query: 350 ELGSVRDRLGLRDSRVNHHSYDSPPGLTAKQTELYWQSLAERTPTS 487
E S+ +R R + PPG+ T E++PTS
Sbjct: 809 ESSSISERCSSRVESLTPERKMEPPGVPLNSTPRSTPDKREKSPTS 854
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 632 PGMKLLLISVSLVNIMDLRW 691
P M LLL+ S+ N+ ++ W
Sbjct: 1013 PSMYLLLVIYSVFNMNNVSW 1032
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 632 PGMKLLLISVSLVNIMDLRW 691
P M LLL+ S+ N+ ++ W
Sbjct: 1013 PSMYLLLVIYSVFNMNNVSW 1032
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,708
Number of Sequences: 336
Number of extensions: 4255
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -