Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0293.Seq
         (820 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.14 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.9  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.9  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 243 KPNRGKFWEVISDEHGIDPSGCY 311
           KP +G FW +  D   +  +GCY
Sbjct: 207 KPGKGSFWSLHPDSGNMFENGCY 229


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 436  RDPSDAYSDRTISSTDKTVRPTTGQGTLH*RSRDSG 543
            R PS     +T ++T  T RPTT    L     DSG
Sbjct: 1175 RPPSTTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSG 1210



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 252  RGKFWEVISDEHGIDPSGCYHGDSDLQLERINVYYNEA 365
            R + W V  D  G      YHGD  +  E I    ++A
Sbjct: 914  RNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 442 PSDAYSDRTISSTDKTVRP 498
           P+    D TI  +D+TVRP
Sbjct: 661 PNMRVQDVTIKFSDRTVRP 679


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,328
Number of Sequences: 336
Number of extensions: 3971
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)