Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0293.Seq
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   7.8  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +2

Query: 341 DQRVLQRGIGWEI-CSSHGSYRLEAGHDGRGEVGTLRMPIQTGQFRLRTKLCGQQLG 508
           DQ++    I ++I C   G   +  G +  GEV   +M  Q    +  ++ CG+ +G
Sbjct: 101 DQKIEINFITFDIPCEHRGLVSIIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNIG 157


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -1

Query: 655 RVAYLIRNRYRHLASVTSENLQ 590
           R++ +I +R+R+L +  SEN++
Sbjct: 220 RISCVIASRHRNLEATESENVR 241


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 793  ESVFSTN*LTAALCYMAPPHNPTL 722
            E+ F  + +T  L   APPH+P +
Sbjct: 1349 ENTFGHDTVTHQLIVHAPPHSPQI 1372


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 14  RWRAALELVDPPGC 55
           RW    E VDP GC
Sbjct: 394 RWFTYQETVDPAGC 407


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,926
Number of Sequences: 438
Number of extensions: 4856
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)